Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03855 ATGAACAAACAACACAGGTACAAAGATGATGTTTTTGACCGCATATGGTATTCTCAACTATTCAATAATAATTGGGCACGATTAAGCACCTCCCTTCACAATGATGATCTACTTCAGAATAATTTTGAACCACCAGCAATTGTGATGAGCAGTGCTCTTACACCAGTAAATGCCGGTGACCCTTTAGAATTGCAGTGGAATGCAGGTAATGGAAATGACCAATACTACCTCTACATGTACTTTAATGAGGTTGAAAATCTGGCACCAAATGAAACTAGAGCGTTCAACATCACAGTGAATGACGAGTTTTGGTATGGACCTGTGATACCTATATACCGAAAAGTAAAAACCATATTTAGTACAACACCTTTAACCGGAGGCAGAAGCTATCTAGTTTCCCTTTCCAAGATAGAGAAATCAACCCTTCCACCCATCCTCAATGCCTTTGAAGTTTATAAAGTAAAAGACTTCTCACAACCAGAAACTGAACAAGATGATGTTGATACTATCACAAACATCAAGAATACTTATGAGGTGGCTAGAAATTGGAAGGGAGATCCATGTGGTCCTGTGAAGTATATGTGGGAAGGCCTAAAATGCAGTATTGATGACAATAACATCCAAAGAATCACATCTTTGAATTTGTCTTCAAGTGGATTGACTGGTCAGATAGCATCTTCTATATCAAAGCTGACTATGTTACAGTATTTGGATTTATCAAACAATAGTTTAAAGGGTTCCTTACCTGATTTTCTGATGCAACTGCGGTCACTAAAAGTCTTAAATGTGGGGAAGAACAAACTTACAGGGTTAGTTCCAAGTGGACTCCTTGAGAGATCAAAAACAGGTTCACTATCATTGAGTGTGGATGATAATCCTGATCTTTGTATGACAGTATCTTGCAAAAAGAACATTGTTGTACCACTTGTTACATCGTTTTCAACATTAATTGGAATCCTTTTGATTTCTCTTGGACTTTGGATATATAGAAGACAAAAAGCTACATGGTCAAAATCTAAGAAAAGGGATTCAATGAAATCAAAGCATCAAACATTCAGTTACACTGAAATTCTCAATATTACTGATAACCTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTACATTGGCACTTTACAAGATCATACTCAAGTAGCTGTAAAAGTTCTTTCAAAATCATCAAAGCAGGGTTATAAGGAATTTCAATCTGAGGCACAACTTCTAACGATTGTTCATCATAGATGTTTGGTCTCTCTCGTTGGGTATTGTGATGAAGGTGAAGTTAAAGCATTGATCTATGAATACATGGCTAATGGAACTCTCCAACAACACTTATTTGATGGTAATACAAATATCTTGAAATGGAATGAGAGACTCAAAATTGCGGTTGATGCAGCACATGGATTGGAATATCTGCATGATGGATGTAAACCACCCATTATCCATAGGGATTTGAAGCCTGCCAACATATTACTAGATGAGAATATGCATGCCAAGATAGCTGATTTTGGCCTAAGTAGAGCTTTTGGTAACGATGTTGATTCTCATATATCCACCCGACCTGCTGGTACACTGGGTTATGTTGATCCTAAATATCAGAGAACAGGAAACACAAATAAAAAAAATGATATCTACAGCTTTGGAATTATTCTATTTGAGTTGATCACCGGTCGAAAAGCACTAACAAGAGCATCTGGTGAATACATTCACATACTTCAATGGGTTATTCCCATAGTTGAAGGAGGAGATATTCAAAATGTTGTTGATCCTAAGTTGGAGGGTGAATTTAGCATCAATTCAGCATGGAAAGCTGTAGAGATTGCCATGTCATGCACATCATCAAATGAAGTTGAAAGACCAGACATGAGCAAAATATTGGTAGAGCTAAAGGAATGTCTATCTTTTGAGATGGTTCAGATAAATAATGGAAGCACCAGAGCTAGAGATGAATTGGTTTCTATAGCTACTGTATCAGAAACCACTATTTTAGCTAGATAA 2004 0.3678 MNKQHRYKDDVFDRIWYSQLFNNNWARLSTSLHNDDLLQNNFEPPAIVMSSALTPVNAGDPLELQWNAGNGNDQYYLYMYFNEVENLAPNETRAFNITVNDEFWYGPVIPIYRKVKTIFSTTPLTGGRSYLVSLSKIEKSTLPPILNAFEVYKVKDFSQPETEQDDVDTITNIKNTYEVARNWKGDPCGPVKYMWEGLKCSIDDNNIQRITSLNLSSSGLTGQIASSISKLTMLQYLDLSNNSLKGSLPDFLMQLRSLKVLNVGKNKLTGLVPSGLLERSKTGSLSLSVDDNPDLCMTVSCKKNIVVPLVTSFSTLIGILLISLGLWIYRRQKATWSKSKKRDSMKSKHQTFSYTEILNITDNLKTIIGEGGFGKVYIGTLQDHTQVAVKVLSKSSKQGYKEFQSEAQLLTIVHHRCLVSLVGYCDEGEVKALIYEYMANGTLQQHLFDGNTNILKWNERLKIAVDAAHGLEYLHDGCKPPIIHRDLKPANILLDENMHAKIADFGLSRAFGNDVDSHISTRPAGTLGYVDPKYQRTGNTNKKNDIYSFGIILFELITGRKALTRASGEYIHILQWVIPIVEGGDIQNVVDPKLEGEFSINSAWKAVEIAMSCTSSNEVERPDMSKILVELKECLSFEMVQINNGSTRARDELVSIATVSETTILAR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03855 667 CDD STKc_IRAK 368 633 - -
Mepo1g03855 667 SMART serkin_6 362 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03855 667 Pfam Protein tyrosine and serine/threonine kinase 364 630 IPR001245 GO:0004672|GO:0006468
Mepo1g03855 667 Gene3D Phosphorylase Kinase; domain 1 335 437 - -
Mepo1g03855 667 ProSiteProfiles Protein kinase domain profile. 362 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03855 667 FunFam Leucine-rich repeat receptor-like protein kinase 340 437 - -
Mepo1g03855 667 PANTHER OS07G0107800 PROTEIN-RELATED 5 635 - -
Mepo1g03855 667 Pfam Malectin-like domain 4 154 IPR024788 -
Mepo1g03855 667 SUPERFAMILY Protein kinase-like (PK-like) 344 631 IPR011009 -
Mepo1g03855 667 Pfam Leucine rich repeat 209 268 IPR001611 GO:0005515
Mepo1g03855 667 SUPERFAMILY L domain-like 165 280 - -
Mepo1g03855 667 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 438 643 - -
Mepo1g03855 667 FunFam Leucine-rich repeat receptor-like kinase 165 298 - -
Mepo1g03855 667 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Mepo1g03855 667 Gene3D Transferase(Phosphotransferase) domain 1 438 654 - -
Mepo1g03855 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Mepo1g03855 667 Gene3D Ribonuclease Inhibitor 167 298 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03855 Mepo-Chr1 44878331 44884667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03855 6 651 Receptor kinase-like Gene Family AT2G19210 45.593 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mepo1g03855 PK_Tyr_Ser-Thr 5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03855 - - mtr:25500366 956.436