Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03845 ATGCCGAAGAACAAGGGAAAGGGAGGAAAGAATCGCAAGAGAGGAAAGAACGAAGCCGATGATGAGAAGCGTGAGCTTGTTTTCAAGGAAGATGGACAAGAATACGCACAGGTTCTTCGTATGCTTGGAAACGGTCGTTGTGAAGCGATGTGTATCGATGGAACAAAGCGTCTCTGTCATATCCGTGGAAAGATGCACAAGAAGGTTTGGATTGCTGCTGGGGATATTATTCTTGTTGGGTTGCGTGATTATCAGGATGATAAGGCTGATGTGATCTTGAAGTATATGCCGGATGAGGCGAGGCTGTTGAAGGCTTATAGCGAGCTTCCGGAAGGTGTGAGGCTTAATGAAGGAATTGGTGGTGGGATTGATGGGGATGATGATGAGGGTGATGGTAATGATTATATTGAGTTTGAGGATGAGGATATTGATAAGATTTGA 441 0.449 MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYSELPEGVRLNEGIGGGIDGDDDEGDGNDYIEFEDEDIDKI 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03845 146 ProSiteProfiles S1 domain IF1 type profile. 22 96 IPR006196 GO:0003723|GO:0003743|GO:0006413
Mepo1g03845 146 Pfam Translation initiation factor 1A / IF-1 32 93 IPR006196 GO:0003723|GO:0003743|GO:0006413
Mepo1g03845 146 Gene3D - 2 146 IPR012340 -
Mepo1g03845 146 MobiDBLite consensus disorder prediction 122 146 - -
Mepo1g03845 146 CDD S1_IF1A 33 109 IPR001253 GO:0003743|GO:0006413
Mepo1g03845 146 FunFam Eukaryotic translation initiation factor 1A 2 146 - -
Mepo1g03845 146 SUPERFAMILY Nucleic acid-binding proteins 2 142 IPR012340 -
Mepo1g03845 146 MobiDBLite consensus disorder prediction 117 146 - -
Mepo1g03845 146 Hamap Translation initiation factor 1A [eif1a]. 16 110 IPR001253 GO:0003743|GO:0006413
Mepo1g03845 146 ProSitePatterns Eukaryotic initiation factor 1A signature. 41 63 IPR018104 GO:0003743|GO:0006413
Mepo1g03845 146 NCBIfam translation initiation factor eIF-1A 14 110 IPR001253 GO:0003743|GO:0006413
Mepo1g03845 146 MobiDBLite consensus disorder prediction 1 25 - -
Mepo1g03845 146 SMART eIF1neu4 28 110 IPR001253 GO:0003743|GO:0006413
Mepo1g03845 146 PANTHER EIF-1A 1 146 IPR001253 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03845 Mepo-Chr1 44813911 44814633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03845 1 146 Eukaryotic Initiation Factors Gene Family AT2G04520 87.671 1.50e-85 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03845 K03236 - egr:104434950 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03845 1 44813911 44814633 Mepo1g03845 1 44813911 44814633 ECH