Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03812 ATGGAGGTAGATTGGGATCTACATGCTGTAGTCAGAGGCTATACCAACCTCACCTCCTCCTCCTCCTCCTCTTCCTCTTCCACCACCTTAGCCACCTCATCAACACCTTCTTATAATAATAATAATAATAACTTTTTCTCTATTTACCCTACAGAACAAAAAAGTCAAGTTTTTTCACTTTCAAACCCCTTTGAAACTAAAAGTTCCATTGAAGAATTGCATGAACTTTGCAAACCTTTCTTCTTCAAATCATCATCATCATCACAACCTCTCTCTTCTGGTTCTTTCTCTTATTCATCACCATCACCAAAATCACCTCATATACAACCAAAACAGCTTCTGGTTAATAACAAGCTTCATCATCATGCTGCTTCTGCCATCACCCCAAGATCCAAAAGAAGGAAGATTCAGCATAAGAAGGTTTGTGAAGTGCAAGCTGAGAAGCTCTCATCAGACATATGGGCATGGAGGAAATATGGTCAAAAACCAATAAAAGGCTCACCATATCCAAGGGGTTATTACAGATGTAGCAGTTCAAAAGGATGTTTAGCTAGGAAACAAGTTGAGAGGAACAAATCAGACCCATCAATGTTCATAGTAACATACACTGGTGAACACAGTCACCCTGCTCCAACTCATAGAAATTCTCTTGCTGGTTCAACAAGGCAGAAGCCATTGTCACCACAAACTGTCACTGCTGAAGACTCTTCCCAACAACCCTTTACAAAACAAGTTTCATCATCCACATCAGAGGCTGAAGAGGAAGATGTTACAACACTCTTAAGTGTAAAGTCAGAGACCAAAGAGGATTTGGAAGAAATGATGAATGATGACGAGGAGGAGAATGAATTTGAGTTATCTGATATGGTTGTAACAGATGATTTCTTTGAAGGTTTAGATGAATTGACAGGTTTTGCTGGAAAAACAGTAGCATCATCTGGTGGTGACTGTTTTGGTGACCCTTTTGCTGCTAGTATTGCTCTTCCTGCTTGTGGTGGCCAATGA 1005 0.401 MEVDWDLHAVVRGYTNLTSSSSSSSSSTTLATSSTPSYNNNNNNFFSIYPTEQKSQVFSLSNPFETKSSIEELHELCKPFFFKSSSSSQPLSSGSFSYSSPSPKSPHIQPKQLLVNNKLHHHAASAITPRSKRRKIQHKKVCEVQAEKLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNKSDPSMFIVTYTGEHSHPAPTHRNSLAGSTRQKPLSPQTVTAEDSSQQPFTKQVSSSTSEAEEEDVTTLLSVKSETKEDLEEMMNDDEEENEFELSDMVVTDDFFEGLDELTGFAGKTVASSGGDCFGDPFAASIALPACGGQ 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03812 334 ProSiteProfiles WRKY domain profile. 145 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g03812 334 SUPERFAMILY WRKY DNA-binding domain 147 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g03812 334 MobiDBLite consensus disorder prediction 208 256 - -
Mepo1g03812 334 Pfam WRKY DNA -binding domain 152 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g03812 334 SMART WRKY_cls 150 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g03812 334 Coils Coil 261 288 - -
Mepo1g03812 334 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 303 IPR044810 GO:0003700
Mepo1g03812 334 MobiDBLite consensus disorder prediction 204 259 - -
Mepo1g03812 334 FunFam WRKY transcription factor 22 134 204 - -
Mepo1g03812 334 Gene3D WRKY domain 134 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g03812 334 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03812 Mepo-Chr1 44365709 44367968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03812 1 313 WRKY Transcription Factor Family AT4G01250 47.335 1.11e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo1g03812 WRKY 8.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03812 K13425 - gmx:100798084 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03812 1 44365709 44367968 Mepo4g04197 4 51856304 51857855 ECH
Mepo1g03812 1 44365709 44367968 Mepo1g03812 1 44365709 44367968 ECH
Mepo1g03812 1 44365709 44367968 Mepo3g02207 3 31781928 31783532 ECH
Mepo1g04364 1 51287650 51292804 Mepo1g03812 1 44365709 44367968 ECH
Mepo3g02207 3 31781928 31783532 Mepo1g03812 1 44365709 44367968 PCT