Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03811 ATGGTCGACGATGGCGAATTCTCCGGCACCATTTGTTCAATCTGCTACGAATCTCTCAACCCCGTTAACGAAGATCTTCAATGCGTATCAATCTGCGGTCACGTCTTTCACGAACTCTGTTTGCAGCAATGGTTTGAGTATTGTAAGACACCGAAGAAGCATACTTGTCCTATTTGCAAGCAAGGATGTAAGGCGAAAGATGCGTGTCGGCTTTATTTTCAATCAATTGGAGATGTGAAGGAAGGTGTTGTTACTCAGAAGAATGTTGGTGTTGAAGAAGATGCTGTTGTTTTGAGGAAGGAAGTTAAGAGATTGGAGGGAAAAGTTTTGGGGATTAGTACGGTTTTGGAGAAACAAACTAAGGAGTTAGATGAACTTAAAGATGAGCTTTGCACTTGCAAGGAGCAGAAAAAGATAGAAATAGCATCAAAGATTGAAGCCTTGAAGCAAAAAACATCCTTACAATTCCAGCTTCATGTGAAATCGGAGGAGCTTGAGAAGTCAAATTTGGACCGTTTTAAATTGCAAGAGAGAAATATGGCTTTGGCTAAAGAACTTGCAGCATTAAAATTAGTGTCTGATCTGGACATTGGTGAAGATGAGGTTTTGAAGCTTGCCACTTTGGGTAATGGGACCAACAGTAAAGAAACAGTCGACACATTAACAAGATCTCTTGTCCTGCGGAACAGGAGTTACAAAGAGTTAATGACCAAGTGTAATCTTCTGGGGAGAGGTGAGGCTCGTTATAGTAAAAAGCTTGAGAAGGCTAATGAGAAGATTATTAAACTGAAGGCAAGGCTACAAGAACTGGAGACAACAATGGAAGTAAAAGAGAATGAATATTTAAAGCATCTAAAAGTTGCAAAGAATATTGAAAACAAAATCAATTCTAATTCTGATGTATTGATGGCTAACGCATTTTCTTCAAAAGAGCAAAACAAACAAAGCACAACATCCAAATCTGGAATGGATTTGAATAAGAATGACAACAACAAATCTTTACAATCTTTGAAGATAGAGAACTCCAAAGCAGCAAAAAATAAAGATGTGAATATTAGTAACGGAAGGGAAACTACCTTATCTCTTGATGAAGATATAGATTGCATCATTATTGATGAAGAAGAATACAAAGATCGTGACAAGAATGATCTAGGAAAGCCAGAAGCAGCACCTGGCACAAAGACTAAAACATCATTGCAAGGAATATGTAATTTGGCCGAATCTTCAAGATTTGATATTGACACTGAAATGGCTGACATTGCTGTTGGCACCACGAATGAAGACGTGACACTACAAGCCAATGCTAAACAAGCTCAACCCATGGTTAATATTAGAAAAGAGTCACCTTTAACAACTTCAAGTTCAGTGGACATCTGCTTTTCTGGTGGATTGCTTGGTCCTGATGGAACTCAACGATTCTTGGGTAAATGGTGCAAGCGTGGACAAAATGGTGAATCAACATCCACAAAAGGGAATTTGATATCTGTAGGAGCTGATGGTAGAGGTGGCACAGTCAAAGTTCTAAGGAATCCAAGCCAAACCTTCTCGGATGGTAAGGAAACTTCAGTAGCTTCAAAAAGGTTGAAGCTTGGACCTAATAAAGCTAGTTCGCAATCCCGGGGATGCCTGCAGATGGAACACTTTTTTGGAAGGGTCAGTCAGTAG 1665 0.394 MVDDGEFSGTICSICYESLNPVNEDLQCVSICGHVFHELCLQQWFEYCKTPKKHTCPICKQGCKAKDACRLYFQSIGDVKEGVVTQKNVGVEEDAVVLRKEVKRLEGKVLGISTVLEKQTKELDELKDELCTCKEQKKIEIASKIEALKQKTSLQFQLHVKSEELEKSNLDRFKLQERNMALAKELAALKLVSDLDIGEDEVLKLATLGNGTNSKETVDTLTRSLVLRNRSYKELMTKCNLLGRGEARYSKKLEKANEKIIKLKARLQELETTMEVKENEYLKHLKVAKNIENKINSNSDVLMANAFSSKEQNKQSTTSKSGMDLNKNDNNKSLQSLKIENSKAAKNKDVNISNGRETTLSLDEDIDCIIIDEEEYKDRDKNDLGKPEAAPGTKTKTSLQGICNLAESSRFDIDTEMADIAVGTTNEDVTLQANAKQAQPMVNIRKESPLTTSSSVDICFSGGLLGPDGTQRFLGKWCKRGQNGESTSTKGNLISVGADGRGGTVKVLRNPSQTFSDGKETSVASKRLKLGPNKASSQSRGCLQMEHFFGRVSQ 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03811 554 MobiDBLite consensus disorder prediction 308 341 - -
Mepo1g03811 554 SMART ring_2 12 59 IPR001841 -
Mepo1g03811 554 Coils Coil 88 108 - -
Mepo1g03811 554 Pfam Ring finger domain 11 60 IPR001841 -
Mepo1g03811 554 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 552 - -
Mepo1g03811 554 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 62 IPR013083 -
Mepo1g03811 554 Coils Coil 246 280 - -
Mepo1g03811 554 CDD RING-H2 12 60 - -
Mepo1g03811 554 SUPERFAMILY RING/U-box 8 65 - -
Mepo1g03811 554 ProSiteProfiles Zinc finger RING-type profile. 12 60 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03811 1 554 C3H Transcription Factor Family AT4G01270 42.124 1.02e-126 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03811 K11985 - gmx:100812811 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03811 1 44337030 44342377 Mepo1g03811 1 44337030 44342377 ECH