Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g03802 | ATGGTATCTATAAACCCTAATCCAACACCACAAGGTTTCTACTTCTTCGATCCTTCTACTATGGCTCTTCCCGGTGTTAACAATCTTCCTCCTCCACCACCGCCGCCATCTACTACCGCCGCCGCATCTACCGTTTCTGAGGATCCGAATAAGAAGATCCGGAAACCATATACGATTACTAAATCTAGAGAGAGTTGGACTGATCAGGAGCATGATAAGTTTCTAGAAGCTCTTCAATTATTCGATCGTGATTGGAAGAAGATTGAAGCCTTTGTTGGTTCAAAAACAGTTATCCAGATACGAAGTCATGCACAGAAGTATTTTCTCAAAGTTCAGAAGAGTGGAACAAGTGAACATGTACCTCCTCCTCGGCCAAAGAGAAAAGCTGCTCATCCATACCCTCAAAAAGCTCCCAAAAACGCTCCTACTGCATCTCCCCAAGTCATGGGGCCATTGCAACCTTCACCTGCTTTTGTTAACCCAACTTACATTTATAGCACAGATTCATCATCTGTGCTTGGTACACCAGTTACTAATCTGCCTTTATCATCTCTGAATTTTAATGCTCCACCACCAGCCAGTTTGCCACAAGTGACTACAGATGACACAGGATGGACTGGATCTGGACAAGCTGTTCCTGTTAATTGTTGCTATAGCAGCAGCAATGAGAAGCAAAGTAGTAAAGGGATTAATGAAGGCAACGCGGGCAAGCCTGTTAAAGTCATGCCGGATTTTGCACAAGTATACCGCTTCATTGGCAGTGTATTTGATCCAAATTCAACTAATCAGCTACAGAGGCTAAAACAGATGGACCCAATAAATGTTGAAACGGCACTGTTGTTGATGAGAAACCTCTCCATTAATTTAACAAGTCCTGAATTTGAGGATCATAAGAGGCTACTCTCATCATATGATCCTGACTGTGAGAAGGCAAAGTTTGCTAATCCAAGCAGCAAATCCATGACTGTTAAATCCGAAAATGCCGTTCTGTCTACTTAG | 999 | 0.4284 | MVSINPNPTPQGFYFFDPSTMALPGVNNLPPPPPPPSTTAAASTVSEDPNKKIRKPYTITKSRESWTDQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGTSEHVPPPRPKRKAAHPYPQKAPKNAPTASPQVMGPLQPSPAFVNPTYIYSTDSSSVLGTPVTNLPLSSLNFNAPPPASLPQVTTDDTGWTGSGQAVPVNCCYSSSNEKQSSKGINEGNAGKPVKVMPDFAQVYRFIGSVFDPNSTNQLQRLKQMDPINVETALLLMRNLSINLTSPEFEDHKRLLSSYDPDCEKAKFANPSSKSMTVKSENAVLST | 332 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g03802 | 332 | CDD | SANT | 65 | 108 | IPR001005 | - | |
Mepo1g03802 | 332 | ProSiteProfiles | SANT domain profile. | 61 | 112 | IPR017884 | - | |
Mepo1g03802 | 332 | MobiDBLite | consensus disorder prediction | 25 | 39 | - | - | |
Mepo1g03802 | 332 | MobiDBLite | consensus disorder prediction | 24 | 57 | - | - | |
Mepo1g03802 | 332 | Gene3D | - | 66 | 113 | - | - | |
Mepo1g03802 | 332 | SUPERFAMILY | Homeodomain-like | 57 | 113 | IPR009057 | - | |
Mepo1g03802 | 332 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 58 | 112 | IPR017930 | - | |
Mepo1g03802 | 332 | PANTHER | SWI/SNF COMPLEX-RELATED | 35 | 290 | - | - | |
Mepo1g03802 | 332 | MobiDBLite | consensus disorder prediction | 113 | 148 | - | - | |
Mepo1g03802 | 332 | FunFam | protein REVEILLE 6 isoform X1 | 65 | 113 | - | - | |
Mepo1g03802 | 332 | SMART | sant | 62 | 110 | IPR001005 | - | |
Mepo1g03802 | 332 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 61 | 110 | IPR006447 | GO:0003677 | |
Mepo1g03802 | 332 | ProSiteProfiles | Myb-like domain profile. | 58 | 108 | IPR001005 | - | |
Mepo1g03802 | 332 | Pfam | Myb-like DNA-binding domain | 63 | 108 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g03802 | Mepo-Chr1 | 44247515 | 44253741 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Mepo1g03802 | Myb_DNA-binding | 1.1e-10 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g03802 | - | - | gmx:778090 | 488.034 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo1g03802 | 1 | 44247515 | 44253741 | Mepo1g03802 | 1 | 44247515 | 44253741 | ECH |