Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03802 ATGGTATCTATAAACCCTAATCCAACACCACAAGGTTTCTACTTCTTCGATCCTTCTACTATGGCTCTTCCCGGTGTTAACAATCTTCCTCCTCCACCACCGCCGCCATCTACTACCGCCGCCGCATCTACCGTTTCTGAGGATCCGAATAAGAAGATCCGGAAACCATATACGATTACTAAATCTAGAGAGAGTTGGACTGATCAGGAGCATGATAAGTTTCTAGAAGCTCTTCAATTATTCGATCGTGATTGGAAGAAGATTGAAGCCTTTGTTGGTTCAAAAACAGTTATCCAGATACGAAGTCATGCACAGAAGTATTTTCTCAAAGTTCAGAAGAGTGGAACAAGTGAACATGTACCTCCTCCTCGGCCAAAGAGAAAAGCTGCTCATCCATACCCTCAAAAAGCTCCCAAAAACGCTCCTACTGCATCTCCCCAAGTCATGGGGCCATTGCAACCTTCACCTGCTTTTGTTAACCCAACTTACATTTATAGCACAGATTCATCATCTGTGCTTGGTACACCAGTTACTAATCTGCCTTTATCATCTCTGAATTTTAATGCTCCACCACCAGCCAGTTTGCCACAAGTGACTACAGATGACACAGGATGGACTGGATCTGGACAAGCTGTTCCTGTTAATTGTTGCTATAGCAGCAGCAATGAGAAGCAAAGTAGTAAAGGGATTAATGAAGGCAACGCGGGCAAGCCTGTTAAAGTCATGCCGGATTTTGCACAAGTATACCGCTTCATTGGCAGTGTATTTGATCCAAATTCAACTAATCAGCTACAGAGGCTAAAACAGATGGACCCAATAAATGTTGAAACGGCACTGTTGTTGATGAGAAACCTCTCCATTAATTTAACAAGTCCTGAATTTGAGGATCATAAGAGGCTACTCTCATCATATGATCCTGACTGTGAGAAGGCAAAGTTTGCTAATCCAAGCAGCAAATCCATGACTGTTAAATCCGAAAATGCCGTTCTGTCTACTTAG 999 0.4284 MVSINPNPTPQGFYFFDPSTMALPGVNNLPPPPPPPSTTAAASTVSEDPNKKIRKPYTITKSRESWTDQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGTSEHVPPPRPKRKAAHPYPQKAPKNAPTASPQVMGPLQPSPAFVNPTYIYSTDSSSVLGTPVTNLPLSSLNFNAPPPASLPQVTTDDTGWTGSGQAVPVNCCYSSSNEKQSSKGINEGNAGKPVKVMPDFAQVYRFIGSVFDPNSTNQLQRLKQMDPINVETALLLMRNLSINLTSPEFEDHKRLLSSYDPDCEKAKFANPSSKSMTVKSENAVLST 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03802 332 CDD SANT 65 108 IPR001005 -
Mepo1g03802 332 ProSiteProfiles SANT domain profile. 61 112 IPR017884 -
Mepo1g03802 332 MobiDBLite consensus disorder prediction 25 39 - -
Mepo1g03802 332 MobiDBLite consensus disorder prediction 24 57 - -
Mepo1g03802 332 Gene3D - 66 113 - -
Mepo1g03802 332 SUPERFAMILY Homeodomain-like 57 113 IPR009057 -
Mepo1g03802 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
Mepo1g03802 332 PANTHER SWI/SNF COMPLEX-RELATED 35 290 - -
Mepo1g03802 332 MobiDBLite consensus disorder prediction 113 148 - -
Mepo1g03802 332 FunFam protein REVEILLE 6 isoform X1 65 113 - -
Mepo1g03802 332 SMART sant 62 110 IPR001005 -
Mepo1g03802 332 NCBIfam myb-like DNA-binding domain, SHAQKYF class 61 110 IPR006447 GO:0003677
Mepo1g03802 332 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Mepo1g03802 332 Pfam Myb-like DNA-binding domain 63 108 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03802 Mepo-Chr1 44247515 44253741 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo1g03802 Myb_DNA-binding 1.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03802 - - gmx:778090 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03802 1 44247515 44253741 Mepo1g03802 1 44247515 44253741 ECH