Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03800 ATGGCATATACCACTATAGATGAAGCCTCTTCATCTTCTTCTCCTTCCATCCAAACATCAAGATGGACTAACCATGTTTTCTTGAGTTTTAGAGGTGAGGACACTCGCCATGGTTTCACGGATCATCTTTTTGCTTCATTGGAAAGAAGAGGGATCAAAACATTCAAGGATGATCATGATCTTAAGAGGGGTGAAGTGATATCATATGAACTCAATAAAGCCATTGAAGAGTCTATGTTTGCTATCATCATTCTCTCACCAAACTATGCTTCCTCAACATGGTGTTTGGATGAGCTACAAAAGATTGTTGAGTGCAGTAAGAGTTTTGGTCAAGCTGTTTTTCCGATCTTCTATGGTGTTGATCCATCTGATGTCAGGCATCAAAGAGGAAGCTTTGATGAAGCTTTTAGAAAACATGAAGAAAAATTCAGTAAAGATAGAATGAAAGTGGAAAGGTGGAGAGAAGCTTTAAGAGAAGTTGCTAGTTACTCCGGCTGGGACTCCAAGGGCCGGCATGAGGCATCATTGGTGGAAACAATAGTTGAACATATTCAGAAAAAATTGATTCCTAAATTGAAAGTTTGCACAGATAACCTTGTTGGAATTGATTCACGGATAAAGGAAGTATATTCGCTAATACGAATGGGGTTAAACAATGTTCGCTTCATAGGCATATGGGGCATGGGCGGCATTGGGAAGACAACTATTGCCAGATTAGTCTATGAAGCGATAAAAAAGGAATTCAAGGTTAGTTGCTTTCTTGCAGACATTAGAGAAACAGTTTCAAAGACAAATGACTTAGCTCGCATCCAAATGCAACTTCTTTCTCATCTTAATATAAGAAGCAATGATTTTTACAACGTTCATGATGGCAAAAAGATATTAGCAAACTCTTTCAACAATAAAAAGGTCCTTCTTGTTCTTGATGACGTGAGTGAATTAAGACAATTGGAGAATTTAGCTGGGAAGCAAGAATGGTTTGGTGCAGGAAGTAGAGTTATAATCACAAGTAGAGATAAGCACTTGTTAGTGACACATGGAGTGCATGAAACTTATAAGGCTAAATGCTTAGTAAAAAACGAAGCACTTAATCTCTTCTGTTTGAAAGCCTTTAAAGAAAATCAACCTAAAGAAGAGTATTTGAGTTTGTGCAAAGAAGTAGTTAAATATACAAGAGGTCTTCCATTAGCACTTGAGGTGTTAGGTTCACATCTTTATGGAAGAACTGCTGAGGTTTGGCATAGTGCCTTAGAACAAATAAAAAGTGTTCCTCACTCCAAAATCCAAGATACATTGAAAATAAGTTATGATAGTTTACAATCTATGGAGAAAAATATGTTTCTAGATATTGCCTGTTTCTTCAAAGGAATGGACAAAGATGGAGTCATAGAAATATTAGAAGATTGTGGTTATTATCCCAAAATTGGAATTGATATTTTGATTGAAAGATCTTTGGTAACTGTGGATAGGGGGGACAATAAGTTGTGGATGCATGATTTGCTTCAAGAAATGGGAAGGAATATTGTGTTTCAAGAATCTCCAAATGATCCTGGAAAACGCAGTAGGTTATGGTCTCAAAAAGATATTGATCAAGTATTGAGAAAAAATAAGGGAACTGATAAAATTCAAGGCATAGCTATGGACTTAGCTCAACCATATGAAGCAAGCTGGAAGATTGAAGCCTTCTCCAAAATAAGTCAGCTAAGGTTACTCTTATTATGTGAATTAAAACTTCCCCTTGGCTTAAACTGTTTCCCTAGTTCACTAAGAGTTCTTGATTGGAGTGGTTGTCCTTTGAAAACCCTGCCACTCACTAATCATTTGGATGAAATTGTTGACGTAAAATTGTATCGTAGCAAAATAGAACAACTTTGGCATGGAACACAGGCACAGGAACATGGCCTACCTAAAGCAAGATTTGACATGCTTATCACAGGGAGCGAAATTCCCTCATGGTTTACACCTTCCAAATATGTTTCTGTTACAAATATGTCAGTCCCTCATAATTGTCCTCCAACTGAATGGGTGGGATTTGCTTTGTGTTTCATGCTGGTAAGTTTTGCTGAACCACCTGAGTTGTGTCATCATGAAGTAAGTTGTTACTTGTTTGGACCAAAGGGTAAATTGTTTATCAGATCCAGAGATTTACCTCCTATGGAACCATATGTCCGTCACCTCTATATTCTCTATCTGACCATCGACGAATGTCGCGAAAGATTTGATGAAGGTGGTGACTGCAGTGAAATTGAATTTGTCTTGAAAACTTATTGCTGTGATGAGTTACAAGTAGTGAGGTGTGGTTGTCGTTTGGTTGTCCGCAGTGTGACTGCAAGTAGTCAGCCACATTTGGACCGTCCGATGATTTCTATGTAG 2373 0.378 MAYTTIDEASSSSSPSIQTSRWTNHVFLSFRGEDTRHGFTDHLFASLERRGIKTFKDDHDLKRGEVISYELNKAIEESMFAIIILSPNYASSTWCLDELQKIVECSKSFGQAVFPIFYGVDPSDVRHQRGSFDEAFRKHEEKFSKDRMKVERWREALREVASYSGWDSKGRHEASLVETIVEHIQKKLIPKLKVCTDNLVGIDSRIKEVYSLIRMGLNNVRFIGIWGMGGIGKTTIARLVYEAIKKEFKVSCFLADIRETVSKTNDLARIQMQLLSHLNIRSNDFYNVHDGKKILANSFNNKKVLLVLDDVSELRQLENLAGKQEWFGAGSRVIITSRDKHLLVTHGVHETYKAKCLVKNEALNLFCLKAFKENQPKEEYLSLCKEVVKYTRGLPLALEVLGSHLYGRTAEVWHSALEQIKSVPHSKIQDTLKISYDSLQSMEKNMFLDIACFFKGMDKDGVIEILEDCGYYPKIGIDILIERSLVTVDRGDNKLWMHDLLQEMGRNIVFQESPNDPGKRSRLWSQKDIDQVLRKNKGTDKIQGIAMDLAQPYEASWKIEAFSKISQLRLLLLCELKLPLGLNCFPSSLRVLDWSGCPLKTLPLTNHLDEIVDVKLYRSKIEQLWHGTQAQEHGLPKARFDMLITGSEIPSWFTPSKYVSVTNMSVPHNCPPTEWVGFALCFMLVSFAEPPELCHHEVSCYLFGPKGKLFIRSRDLPPMEPYVRHLYILYLTIDECRERFDEGGDCSEIEFVLKTYCCDELQVVRCGCRLVVRSVTASSQPHLDRPMISM 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03800 790 Gene3D - 17 186 IPR035897 -
Mepo1g03800 790 ProSiteProfiles TIR domain profile. 22 188 IPR000157 GO:0007165
Mepo1g03800 790 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 653 IPR044974 GO:0006952
Mepo1g03800 790 SUPERFAMILY "Winged helix" DNA-binding domain 426 533 IPR036390 -
Mepo1g03800 790 Pfam NB-ARC domain 214 442 IPR002182 GO:0043531
Mepo1g03800 790 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 190 - -
Mepo1g03800 790 PRINTS Disease resistance protein signature 298 312 - -
Mepo1g03800 790 PRINTS Disease resistance protein signature 222 237 - -
Mepo1g03800 790 PRINTS Disease resistance protein signature 391 405 - -
Mepo1g03800 790 SMART till_3 23 163 IPR000157 GO:0007165
Mepo1g03800 790 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 166 IPR035897 -
Mepo1g03800 790 Gene3D - 187 351 IPR027417 -
Mepo1g03800 790 FunFam Disease resistance protein (TIR-NBS-LRR class) 358 440 - -
Mepo1g03800 790 Pfam TIR domain 25 200 IPR000157 GO:0007165
Mepo1g03800 790 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 450 IPR027417 -
Mepo1g03800 790 Gene3D - 356 440 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03800 Mepo-Chr1 44229257 44234326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03800 15 631 WRKY Transcription Factor Family AT4G12020 30.854 2.59e-76 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03800 - - psat:127074983 1068.14