Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g03796 | ATGGATGTAAAAGTGGCAAGGAGTAGTAGAACTGAACAAGTCATTGGGAAAACATGTGCTTATTGGCTCGCTGGGAAATGCAACAGAAATCCTTGTAGGTTTCTTCATAGTGTAGCACCATCCACTGCTTCTTGTAATGCTGCCAACGCTGGATATCATAATGCTGCACAGAAGCGGCATTTCCCATCGCACGGTGAAACATCATCATACCCGTCTTCTTGCAGAGCTGATGCTGGATATTATAATGCTGCAAAGAAGCACCATTCATCGTATGTGTATGAGAAGCCCCTTCCCAAACATAACACGAAGGCTGCATCATATGTGTATGAGAAGCCCCTTCCCAAACATAATGCGAAGACAGTCTTGAATAGAAAGATTGGAGATAACAGAGACACGACTCAAGTCGTTGAGGCTTCCCTTTCCAAACATAATACGAAGACTGTCTTGAATAGAAAGACTGGAGATAACAAAGCAAGCACAGAAGTTGCTGAGGCTTCCCTTCCCAAACATAATACTGAACCGGTCTTGAATAGAAAGATTGGAGATGACAGAGATGGGACAGAAGTAGATGAAGTTTCTCAGAAGCCTTCACCGAGAATCTGCAAATACTGGGTGAATGACAGTTGTGTTCATAGTGATCAGTGCCAGAATTTGCATTCATGGTTTTATGGTGATGGGTTTTCCTCAATAGCAAAGCTTGAGGGACACAAGAAGCTTATCACTGGAATGACAATTCCAGATGGATCAGACAAACTTTATACTGGTAGCACGGATGGGACACTTCGGACATGGGACTGCCGTACTGGTCAATGTGTTGATGTGACGAATCTGGGCGCTGAAGTTACCTCTTTGATCAGTGAGGGCCCATGGATTTTTGTTGGTATGAAGGACACCGTCAAGGCATGGCATATTTCGACTGCTGCACCTTTTACTCTTGATGGACCTAAGGGACAAGTCCATGCTATGATTGTTGCCAAGGATACTCATACACTCTTAGCTGGAGCAGAGGATGGTGTAATTTCTGCATGGAGAGGCAGCTCCGAAGCCAATTCCCCTTTTAAACTGGTTGCATCACTTTGTGGCCACACTAAATCTGTTGTTTGCCTAGCTGTTGGGGGCTCCAAGATGCTGTATTCAGGATCCAAGGATCAAACCATTAAGGTTTGGGACCTTGACACATTTGAGTGTACAATGACACTCAATGCACATACAGACGCAGTCACCTCCCTTATTTGTTGGGACAAGTTCTTGTTATCCGGTTCATCTGACTGTACCATCAAGGTCTGGTATCAAAACGAAGCAGGGACTTTGGAAGTGGCATATTCACACAATGTGGAAAATGGTGTTGTTACACTCTCTGGGATGACTGATCCAGAAAATAAGCCTATAATATTCTGCTCAGCCGGAGACAATTCAGTTCACCTCTATGAACTGCCATCATTTGCAGAGAGGGGTAGACTGTTTGCAAAGGAAGAAGTTGGATTAGTTGATATAGCCCCAGGCGGTCTCTTCTTCACTGGAGAAAGATCTGGTTTGCTGACAGTCTGGAAATGGTTGGAAGAATACAAGGTTGTGGCATCCTCTTGA | 1587 | 0.4442 | MDVKVARSSRTEQVIGKTCAYWLAGKCNRNPCRFLHSVAPSTASCNAANAGYHNAAQKRHFPSHGETSSYPSSCRADAGYYNAAKKHHSSYVYEKPLPKHNTKAASYVYEKPLPKHNAKTVLNRKIGDNRDTTQVVEASLSKHNTKTVLNRKTGDNKASTEVAEASLPKHNTEPVLNRKIGDDRDGTEVDEVSQKPSPRICKYWVNDSCVHSDQCQNLHSWFYGDGFSSIAKLEGHKKLITGMTIPDGSDKLYTGSTDGTLRTWDCRTGQCVDVTNLGAEVTSLISEGPWIFVGMKDTVKAWHISTAAPFTLDGPKGQVHAMIVAKDTHTLLAGAEDGVISAWRGSSEANSPFKLVASLCGHTKSVVCLAVGGSKMLYSGSKDQTIKVWDLDTFECTMTLNAHTDAVTSLICWDKFLLSGSSDCTIKVWYQNEAGTLEVAYSHNVENGVVTLSGMTDPENKPIIFCSAGDNSVHLYELPSFAERGRLFAKEEVGLVDIAPGGLFFTGERSGLLTVWKWLEEYKVVASS | 528 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g03796 | 528 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 400 | 429 | IPR001680 | GO:0005515 | |
Mepo1g03796 | 528 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 359 | 399 | IPR001680 | GO:0005515 | |
Mepo1g03796 | 528 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 233 | 270 | - | - | |
Mepo1g03796 | 528 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 252 | 266 | IPR019775 | - | |
Mepo1g03796 | 528 | ProSiteProfiles | Zinc finger C3H1-type profile. | 195 | 222 | IPR000571 | GO:0046872 | |
Mepo1g03796 | 528 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 377 | 391 | IPR019775 | - | |
Mepo1g03796 | 528 | Gene3D | - | 217 | 349 | IPR015943 | GO:0005515 | |
Mepo1g03796 | 528 | ProSiteProfiles | Zinc finger C3H1-type profile. | 18 | 39 | IPR000571 | GO:0046872 | |
Mepo1g03796 | 528 | SMART | c3hfinal6 | 15 | 38 | IPR000571 | GO:0046872 | |
Mepo1g03796 | 528 | SMART | c3hfinal6 | 195 | 221 | IPR000571 | GO:0046872 | |
Mepo1g03796 | 528 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 359 | 393 | - | - | |
Mepo1g03796 | 528 | PANTHER | - | 17 | 527 | IPR044715 | - | |
Mepo1g03796 | 528 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 233 | 274 | IPR001680 | GO:0005515 | |
Mepo1g03796 | 528 | PRINTS | G protein beta WD-40 repeat signature | 417 | 431 | IPR020472 | - | |
Mepo1g03796 | 528 | PRINTS | G protein beta WD-40 repeat signature | 252 | 266 | IPR020472 | - | |
Mepo1g03796 | 528 | PRINTS | G protein beta WD-40 repeat signature | 377 | 391 | IPR020472 | - | |
Mepo1g03796 | 528 | Pfam | WD domain, G-beta repeat | 395 | 429 | IPR001680 | GO:0005515 | |
Mepo1g03796 | 528 | Pfam | WD domain, G-beta repeat | 230 | 265 | IPR001680 | GO:0005515 | |
Mepo1g03796 | 528 | Pfam | WD domain, G-beta repeat | 354 | 390 | IPR001680 | GO:0005515 | |
Mepo1g03796 | 528 | SMART | WD40_4 | 305 | 344 | IPR001680 | GO:0005515 | |
Mepo1g03796 | 528 | SMART | WD40_4 | 352 | 390 | IPR001680 | GO:0005515 | |
Mepo1g03796 | 528 | SMART | WD40_4 | 226 | 265 | IPR001680 | GO:0005515 | |
Mepo1g03796 | 528 | SMART | WD40_4 | 393 | 430 | IPR001680 | GO:0005515 | |
Mepo1g03796 | 528 | Gene3D | - | 350 | 527 | IPR015943 | GO:0005515 | |
Mepo1g03796 | 528 | SUPERFAMILY | WD40 repeat-like | 226 | 481 | IPR036322 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g03796 | Mepo-Chr1 | 44201615 | 44205120 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g03796 | 221 | 441 | Eukaryotic Initiation Factors Gene Family | AT2G46290 | 25.620 | 6.47e-10 | 58.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g03796 | - | - | mtr:25500966 | 642.884 |