Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03792 ATGTCTGCTATTAGGTTTTCTCATGTAAAGTCTCTTCATAAGGGTTTTTCCAATTTCAATGTCCAAAATTATCACTTTAATGGGTCATTGAATCTTGCAAGAATTTCCAGTTTTTGTACTGATTTCTCGAGCCATGGTTATTCGAAAAATGGGTTTAAGTCACCTAAGATGTTTGCTCAGACTGAGTTTAGAAATTTGGGTTCTTTATCAGGTCATAGGGGTTTCAAATTCAATGCTGCATTTGAAACCCAAAGGTTTAATTCACCCAGGTTATATTTCAGTGCTGTTAATGTTCCTTTTGCTTCGAATTCGATGATGACCAGTGGGTTGAGTTCCCGAATGTATTCATCGGGTCTGGGAGGGGAAGGAAGTAAGAATGGTGAAACAGAAGTGGGTGTTGGGACTGGTGTGAGTGATGTGAAAGGTGGGGGTGGTGGTGATTCGTTTGTTTCGGGTGATTTGGTTGATAGGATGAAAGATACATGGAAGAGTGTTGTTGAGGCAGTTTCATATGCTGGTGATAAGGTTAAGGAAGGTTCTGATGGTGTTACTCCATATGCTCAACAGTTTCTTGATTCACATCCTTATCTTAACATGGTGGTTGTTCCGGTTGGTGGTACTTTAACTGCTACTCTAGTAGGTTGGTTCATTTTACCGAGGATTTTGAGGAAATTTCACAAATATGGAATGCAAAGTCCGGTTTCTCTGTTACAAGGAAGCTTGTCAGGGGAGCCAGTTCCTTATGAAAAAAGTTTTTGGGGTGCTATGGAAGACCCGGTGCGATATTTGGTTACCTTCTTGGCATTCTCACAAATTGCTGTAATGGTAGCTCCAACAGCTATAGCCTCGCAATATCTTGCACCCACTTGGAGGGGTGCAGTGATTCTTTCATTTGTATGGTTTTTGCATAGATGGAAAACAAATGTTTTTGCACGGACGTTGACCAGTCAAAGTGTACTTGGACTTGATAGGGAGAAGATGCTTGCTCTAGACAAAATCTCATCTATCGGTCTATTTGTGATTGGTATAATGGCTTTGGCTGAGGCTTGTGGTGTGGCTGTGCAATCTATTGTAACAGTTGGTGGTGTAGGAGGAGTTGCTACTGCTTTTGCTGCCAGAGACGTACTTGGCAATGTGTTCAGCGGTTTATCCATGCAGTTTTCTAAACCCTTCTCAATTGGAGATACAATAAAAGCTGGATCGATAGAAGGTCAAGTGGTGGAAATTGGTCTTACTAGCACATCATTGCTAAGCCCTGAGAAGTTCCCAGTCATTGTGCCGAACTCATTTTTTTCTAGCCAGGTAATTGTGAACAAATCCCGTGCTGAATATCGTGCCATTCTTACCAAAATCCCTCTTCAAACTGAAGATTTAAGTAAGATTCCCCATATATCGAATGATGTAAAAGGCATGTTAACATCAAATGCAAAAGTTTTTTTAGGAAAAGATGTTCCCTGCTGTTTCTTGTCACGCATAGAAAGTAAATATGCTGAACTGACTCTTGGATACAACCTCAAGAACATGCGCAAAGATGAGCTGTACTCTGCAGAACAAGATATTCTCCTGCAAGCAGTTCAGATCATTAAGAATCATGGTGTTGCTCTTGGAAACACATGGAATGACACTAAGTAA 1632 0.4081 MSAIRFSHVKSLHKGFSNFNVQNYHFNGSLNLARISSFCTDFSSHGYSKNGFKSPKMFAQTEFRNLGSLSGHRGFKFNAAFETQRFNSPRLYFSAVNVPFASNSMMTSGLSSRMYSSGLGGEGSKNGETEVGVGTGVSDVKGGGGGDSFVSGDLVDRMKDTWKSVVEAVSYAGDKVKEGSDGVTPYAQQFLDSHPYLNMVVVPVGGTLTATLVGWFILPRILRKFHKYGMQSPVSLLQGSLSGEPVPYEKSFWGAMEDPVRYLVTFLAFSQIAVMVAPTAIASQYLAPTWRGAVILSFVWFLHRWKTNVFARTLTSQSVLGLDREKMLALDKISSIGLFVIGIMALAEACGVAVQSIVTVGGVGGVATAFAARDVLGNVFSGLSMQFSKPFSIGDTIKAGSIEGQVVEIGLTSTSLLSPEKFPVIVPNSFFSSQVIVNKSRAEYRAILTKIPLQTEDLSKIPHISNDVKGMLTSNAKVFLGKDVPCCFLSRIESKYAELTLGYNLKNMRKDELYSAEQDILLQAVQIIKNHGVALGNTWNDTK 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03792 543 Gene3D - 390 438 IPR023408 -
Mepo1g03792 543 Gene3D - 290 389 - -
Mepo1g03792 543 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 289 373 IPR011014 GO:0016020
Mepo1g03792 543 Pfam Mechanosensitive ion channel 332 534 IPR006685 GO:0016020|GO:0055085
Mepo1g03792 543 SUPERFAMILY Sm-like ribonucleoproteins 374 439 IPR010920 -
Mepo1g03792 543 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 155 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03792 Mepo-Chr1 44156136 44161973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03792 155 542 Mechanosensitive Ion Channel Family AT4G00290 66.753 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03792 K22047 - gmx:100814954 703.36