Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03788 ATGGCATCTACCACCATAGATGAAGTCTCTTCATCTTCTTCTCCTTCCATCCAAGCATCAAGATGGACCAACCATGTTTTCTTGAGTTTTAGAGGTGAGGACACTCGCCATGGTTTCACGGATCATCTTTTTGCTTCATTGGAAAGAAGAGGGATCAAAACATTCAAGGATGATCATGATCTTAAGAGGGGTGAAGTGATATCATTGGAACTCAATAAAGCCATTGAAGAGTCTTTGTTTGCTATCATCATTCTCTCACCAAACTATGCTTCCTCAACATGGTGTTTGGATGAGCTACAAAAGATTGTTGAGTGCAGTAAGAGTTTTGGTCAAGCTGTTTTACCAATCTTCTATGGTGTTGATCCATCTGATGTCAGGCATCAAAGAGGAAGCTTTGATGAAGCTTTTAGAAAACATGAAGAAAAATTCAGAAAAGATAGAATGAAAGTGGAAAGATGGAGAGATGCTTTAAGAGAAGTTGCTGGTTACTCCGGTTGGGACTCCAAGGGCCGGCATGAGGCATCATTGGTGGAAACAATAGTTGAACATATTCAGAAAAAATTGATTCCTAAATTGAAGGTTTGCACAGATAACCTTGTTGGAATTGATTCGCGGATAAAGGAAGTATATTCGCTACTAGGAATGGGGTTAAACAACGTTCGCTTCATAGGAATATGGGGCATGGGCGGCATTGGAAAGACAACTATTGCTAGATTAGTCTATGAAGCGATCAAAGACGAGTTCAAGGTTAGTTGCTTTCTTGCAGACATTAGAGAAACAGCTTCTAAGACAAATGACTTAGCTCACATCCAAATGAAACTTCTTTCTCATCTTAATATGAGAAGCAATGATTTTTACAACGTTCATGATGGCAAAAAGATATTAGCAAACTCCTTCAACAACAAAAAGGTTCTTCTCGTTCTTGATGATGTGAGCGAATTAAGCCAATTGGAGAATTTAGCCGGGAAGCAAGAATGGTTTGGTGCAGGAAGTAGGGTTATAATCACAAGTAGAGATAAGCACTTGTTAATGACACATGGAGTGCATGAAACTTATAAGGCTAAAGGCTTAGTAAAAAATGAAGCACTTAAGCTCTTCTGTTTGAAAGCCTTTAAAGAAAATCAACCTAAAGAAGAGTATTTGAGTTTATGCAAAGAAGTAGTTGAATATGCAAGAGGTCTTCCATTAGCCCTTGAGGTATTAGGTTCACATCTTCATGGAAGAACTCTCGATGTTTGGCATAGTGCTTTAGAACAAATAAAAAGTGTTCCACACTCCATTATCCAAGATACATTGAAAATAAGTTATGATAGTTTACAATCTATGGAGAAAAATATGTTTCTAGATATTGCCTGTTTCTTTAAAGGAATGGACAAAGATGGAGTAATAGAAATATTAGAATATTGTGGTTATTATCCCAAAATTGGAATTGATATTTTGATTGAAAGATCTTTGGTAACTTTGGATAGCGGGGACAATAAATTGCGGATGCATGATTTGCTTCAAGAAATGGGAAGGAATATTGTGTTTCAAGAATCTCCAAATGATCCTGGAAAATGCAGTAGGTTATGGTCTCAAAAGGACATTGATCAAGTATTGAGAAAAAATAAGGGAACTGATAAAATTCAAGGCATAGTTATGGACTTAGTTCAACCATATGAAGCAAGCTGGAAGATTGAAGCCTTCTCCAAAATAAGTCAGCTAAGGTTACTCAAATTATGTGAAATAAAACTTCCCCTTGGCCTAAACTGCTTCCCTAGTTCACTAAGAGTTCTTGATTGGAGTGGTTGTCCTTTGAAAACCCTGCCACTCACTAATCATTTGGATGAAATTGTTGACCTCAAATTGTGTCATAGCAAAATAGAACAACTTTGGTATGGAACACAGTTTCTTGAAAATCTGAAGTCCATCAACTTGAGCTTTTCGAAGTCTCTGAAGCGATCGCCCGACTTTGTTGGTGTACCAAATCTTGAATTCTTGGTTCTTGAAGGTTGTACAAGCTTAACTGAGATTCATCCTTCCCTTTTAAGCCACAAGAAACTTGGTCTACTGAATTTGAAAGACTGCAAAAGACTCAAAACACTTCCATGTAAAATAGAGATGAGTTCTTTGAAGGGTTTAAGTCTTTCTGGTTGCTGTGAATTTAAACATCTTCCAGAGTTTGACGAAAGTATGGAAAATCTATCAATGCTTTCCATAGAGGAAACTGCTATAAAAAAACTTCCATCTTCACTTGGATTTCTTGTATCCCTTCTTAGCCTGGATTTAGAAAATTGCAAGAACCTTGTTTGTCTTCCAGATAAAATAAGTGAATTGAAGTCCCTCTTAATTCTGAATGTTTCTGGCTGCTCAAAACTCCATAGTTTTCCAGAAGGTTTAAAGGAAATGAAGTCTTTAGAGGAACTTATTGCAAATGACACTGCTATTGAAGAACTACCTTCATATGTTTTTTATTTAAAAAACCTCAAAATAATGTCATTTGCTGGTTGCAAAGGACCAGTTACTAAGTCAGTGAATACATTTTTTCTACCCTTTACACAACTGCTAGGTAGTCCACAAGAACCTAATGGATTTAGATTGCCACCTAAATTATCTCTACCTTCATTGAGGAATTTAAATTTAAGTTACTGCAATCTATCTGAAGAATCAATGCCAAAAGATTTTTCCAACTTATCTTCCTTGGTTGTTTTAAATCTCTCTGGAAACAATTTTGTTAGGCCACCAAGTAGCATTTCGAAACTTCCAAAGCTTGAATATCTTAGGCTAAACTGTTGTGAAATGCTTCAGAAGTTTCCAGAATTCCCATCAAGTATGAGGTTATTAGATGCAAGTAATTGTGCTTCATTGGAAACTTCCAAATTTAATCTATCTAGACCATGCAGTCTCTTTGCATCGCAGATACAACGGCACTCGCATTTGCCCAGATTACTTAAGAGCTATGTTGAGGTTTGCATCCTAGCTTCCCTAGCATTTTCAAAATAA 2982 0.3665 MASTTIDEVSSSSSPSIQASRWTNHVFLSFRGEDTRHGFTDHLFASLERRGIKTFKDDHDLKRGEVISLELNKAIEESLFAIIILSPNYASSTWCLDELQKIVECSKSFGQAVLPIFYGVDPSDVRHQRGSFDEAFRKHEEKFRKDRMKVERWRDALREVAGYSGWDSKGRHEASLVETIVEHIQKKLIPKLKVCTDNLVGIDSRIKEVYSLLGMGLNNVRFIGIWGMGGIGKTTIARLVYEAIKDEFKVSCFLADIRETASKTNDLAHIQMKLLSHLNMRSNDFYNVHDGKKILANSFNNKKVLLVLDDVSELSQLENLAGKQEWFGAGSRVIITSRDKHLLMTHGVHETYKAKGLVKNEALKLFCLKAFKENQPKEEYLSLCKEVVEYARGLPLALEVLGSHLHGRTLDVWHSALEQIKSVPHSIIQDTLKISYDSLQSMEKNMFLDIACFFKGMDKDGVIEILEYCGYYPKIGIDILIERSLVTLDSGDNKLRMHDLLQEMGRNIVFQESPNDPGKCSRLWSQKDIDQVLRKNKGTDKIQGIVMDLVQPYEASWKIEAFSKISQLRLLKLCEIKLPLGLNCFPSSLRVLDWSGCPLKTLPLTNHLDEIVDLKLCHSKIEQLWYGTQFLENLKSINLSFSKSLKRSPDFVGVPNLEFLVLEGCTSLTEIHPSLLSHKKLGLLNLKDCKRLKTLPCKIEMSSLKGLSLSGCCEFKHLPEFDESMENLSMLSIEETAIKKLPSSLGFLVSLLSLDLENCKNLVCLPDKISELKSLLILNVSGCSKLHSFPEGLKEMKSLEELIANDTAIEELPSYVFYLKNLKIMSFAGCKGPVTKSVNTFFLPFTQLLGSPQEPNGFRLPPKLSLPSLRNLNLSYCNLSEESMPKDFSNLSSLVVLNLSGNNFVRPPSSISKLPKLEYLRLNCCEMLQKFPEFPSSMRLLDASNCASLETSKFNLSRPCSLFASQIQRHSHLPRLLKSYVEVCILASLAFSK 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03788 993 Pfam Leucine Rich Repeat 612 629 IPR011713 -
Mepo1g03788 993 SMART till_3 23 163 IPR000157 GO:0007165
Mepo1g03788 993 Gene3D Ribonuclease Inhibitor 556 723 IPR032675 -
Mepo1g03788 993 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 450 IPR027417 -
Mepo1g03788 993 Gene3D - 188 351 IPR027417 -
Mepo1g03788 993 SMART LRR_typ_2 891 914 IPR003591 -
Mepo1g03788 993 SMART LRR_typ_2 654 678 IPR003591 -
Mepo1g03788 993 SMART LRR_typ_2 796 819 IPR003591 -
Mepo1g03788 993 SMART LRR_typ_2 748 772 IPR003591 -
Mepo1g03788 993 SMART LRR_typ_2 866 890 IPR003591 -
Mepo1g03788 993 Gene3D - 18 187 IPR035897 -
Mepo1g03788 993 Pfam NB-ARC domain 218 442 IPR002182 GO:0043531
Mepo1g03788 993 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 721 IPR044974 GO:0006952
Mepo1g03788 993 ProSiteProfiles TIR domain profile. 22 188 IPR000157 GO:0007165
Mepo1g03788 993 Pfam TIR domain 25 200 IPR000157 GO:0007165
Mepo1g03788 993 PRINTS Disease resistance protein signature 298 312 - -
Mepo1g03788 993 PRINTS Disease resistance protein signature 770 786 - -
Mepo1g03788 993 PRINTS Disease resistance protein signature 222 237 - -
Mepo1g03788 993 PRINTS Disease resistance protein signature 391 405 - -
Mepo1g03788 993 Gene3D Ribonuclease Inhibitor 724 840 IPR032675 -
Mepo1g03788 993 Gene3D Ribonuclease Inhibitor 853 961 IPR032675 -
Mepo1g03788 993 Gene3D - 356 446 IPR042197 -
Mepo1g03788 993 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 190 - -
Mepo1g03788 993 SUPERFAMILY L domain-like 496 941 - -
Mepo1g03788 993 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 166 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03788 Mepo-Chr1 44107894 44112770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03788 9 854 WRKY Transcription Factor Family AT4G12020 32.571 5.95e-111 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03788 - - gmx:100815486 1370.53