Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03787 ATGGGTTTTCCGGTAGGCTACGCCGAAGTATTATTCCCAAACCTATTCCTCCACACTTTAACCCTCCTCGGCCTCCTCCGAAGCCTCGTCTTCCTCCTCTTCCACTTCCTCGGCCTCTCAGATTTCCTCGAAACCGATACCATCCACACCGGAGAAGAAGCTACATCCACGCCAGAACCATGCAAAAACCCCTCCGTATCAGCACTTCTGATCCGGGAGTTTTTACCGGCAACAAAATACGGCGAACTCACCGACACAGAAGAAGATTGTTGCTGTGCTGTTTGTTTGTTTGAATTCTCCGAGGAAGAAGAGATCCGATGTTTGAAGAACTGTCGACATATTTTTCATCGAAATTGTGTCGACCGTTGGATTGATCTTGATCAGAAAACTTGTCCACTTTGTAGAACAGGTTTTGTTCCTGATGACATGGTTGATGATTATAATCAACGTCTTTGGATTGCTTCTGGTATTAGTGAGTTTTATAGTTATGCAGATTATACTTCTTCTTTCTAA 513 0.4425 MGFPVGYAEVLFPNLFLHTLTLLGLLRSLVFLLFHFLGLSDFLETDTIHTGEEATSTPEPCKNPSVSALLIREFLPATKYGELTDTEEDCCCAVCLFEFSEEEEIRCLKNCRHIFHRNCVDRWIDLDQKTCPLCRTGFVPDDMVDDYNQRLWIASGISEFYSYADYTSSF 170
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03787 170 ProSiteProfiles Zinc finger RING-type profile. 92 135 IPR001841 -
Mepo1g03787 170 PANTHER - 70 150 - -
Mepo1g03787 170 SMART ring_2 92 134 IPR001841 -
Mepo1g03787 170 Pfam Ring finger domain 92 135 IPR001841 -
Mepo1g03787 170 SUPERFAMILY RING/U-box 85 142 - -
Mepo1g03787 170 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 141 IPR013083 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mepo1g03787 Mepo-Chr1 44095217 44095962 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03787 1 156 C3H Transcription Factor Family AT1G63840 46.875 7.85e-50 156
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03787 K16281 - gmx:100790975 215.698
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02171 3 31254069 31255133 Mepo1g03787 1 44095217 44095962 PCT