Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g03787 | ATGGGTTTTCCGGTAGGCTACGCCGAAGTATTATTCCCAAACCTATTCCTCCACACTTTAACCCTCCTCGGCCTCCTCCGAAGCCTCGTCTTCCTCCTCTTCCACTTCCTCGGCCTCTCAGATTTCCTCGAAACCGATACCATCCACACCGGAGAAGAAGCTACATCCACGCCAGAACCATGCAAAAACCCCTCCGTATCAGCACTTCTGATCCGGGAGTTTTTACCGGCAACAAAATACGGCGAACTCACCGACACAGAAGAAGATTGTTGCTGTGCTGTTTGTTTGTTTGAATTCTCCGAGGAAGAAGAGATCCGATGTTTGAAGAACTGTCGACATATTTTTCATCGAAATTGTGTCGACCGTTGGATTGATCTTGATCAGAAAACTTGTCCACTTTGTAGAACAGGTTTTGTTCCTGATGACATGGTTGATGATTATAATCAACGTCTTTGGATTGCTTCTGGTATTAGTGAGTTTTATAGTTATGCAGATTATACTTCTTCTTTCTAA | 513 | 0.4425 | MGFPVGYAEVLFPNLFLHTLTLLGLLRSLVFLLFHFLGLSDFLETDTIHTGEEATSTPEPCKNPSVSALLIREFLPATKYGELTDTEEDCCCAVCLFEFSEEEEIRCLKNCRHIFHRNCVDRWIDLDQKTCPLCRTGFVPDDMVDDYNQRLWIASGISEFYSYADYTSSF | 170 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g03787 | 170 | ProSiteProfiles | Zinc finger RING-type profile. | 92 | 135 | IPR001841 | - | |
Mepo1g03787 | 170 | PANTHER | - | 70 | 150 | - | - | |
Mepo1g03787 | 170 | SMART | ring_2 | 92 | 134 | IPR001841 | - | |
Mepo1g03787 | 170 | Pfam | Ring finger domain | 92 | 135 | IPR001841 | - | |
Mepo1g03787 | 170 | SUPERFAMILY | RING/U-box | 85 | 142 | - | - | |
Mepo1g03787 | 170 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 71 | 141 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g03787 | Mepo-Chr1 | 44095217 | 44095962 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g03787 | 1 | 156 | C3H Transcription Factor Family | AT1G63840 | 46.875 | 7.85e-50 | 156 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g03787 | K16281 | - | gmx:100790975 | 215.698 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo3g02171 | 3 | 31254069 | 31255133 | Mepo1g03787 | 1 | 44095217 | 44095962 | PCT |