Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03779 ATGGGAGGTTGCTGTTGTTCTGCCAGAAAAACTCATTTGCATGGAACTCCAGTGTATTACTATTGCCCACCGATTTTAGAAGAGCACGATCCTTTGGCTTCTAATGACACTGCAAACGATTCTCTCACTGCTGGATTACTGGTAGGCTTGAACGTGGAAGAATCCACACCTGATACTTATCAGCCTCCTCCTGCACCTCTGCCTTATGATGTGGTCTTGGGAATTCCAGTGTCAACAAACTCTGAGTCAGGCAAAGACACAGTTAGTGGTAGTAGTTTTGAAACTTTAGTTACATGTGAAGATATTGAAGAATCTGACCTTAAAGCTCAAGCTAAATCTGCACCAACGTCTCCAACCAAGGCAGAACTGTGGAAATCAAATGAACCTCATGCATTGGTGATAGAAGAAGAGGACGGCTGTCCAATTTGCCTTGAAGAATATGATGTTGAGAATCCTAAAACTCTTTCAAAATGTGAACACCACTTTCACCTGGCTTGCATTCTTGAGTGGATGGAAAGAAGTGACTCTTGTCCTATATGTGATCAGGAGATGATATTTGTTCAAGAACTGGACTAG 576 0.4236 MGGCCCSARKTHLHGTPVYYYCPPILEEHDPLASNDTANDSLTAGLLVGLNVEESTPDTYQPPPAPLPYDVVLGIPVSTNSESGKDTVSGSSFETLVTCEDIEESDLKAQAKSAPTSPTKAELWKSNEPHALVIEEEDGCPICLEEYDVENPKTLSKCEHHFHLACILEWMERSDSCPICDQEMIFVQELD 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03779 191 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 37 186 - -
Mepo1g03779 191 Pfam Ring finger domain 140 180 IPR001841 -
Mepo1g03779 191 ProSiteProfiles Zinc finger RING-type profile. 140 181 IPR001841 -
Mepo1g03779 191 FunFam Putative E3 ubiquitin-protein ligase RHB1A 116 185 - -
Mepo1g03779 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 187 IPR013083 -
Mepo1g03779 191 SMART ring_2 140 180 IPR001841 -
Mepo1g03779 191 SUPERFAMILY RING/U-box 131 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03779 Mepo-Chr1 43996891 44003053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03779 1 191 C3H Transcription Factor Family AT4G00335 57.068 5.44e-74 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03779 - - tpra:123885727 339.347