Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03778 ATGTTCCTCCTTTTTCTCTTCCTTCTCTTACCTCACTTCACTCTTTCCAACACAATCATTTTATCACAAAACCAAACACTCTTAAGCCAAAACCAAACCTTCCAACTTGGTTTCTTCAACTTAGAACAACAAAACAACCAACAACCTCGTTACTATCTTTCTATCCGTTTCACTTCCCTCCCTTCCCCAAACATCATTTGGGTCGCAAACCGGAATAAACCCATTTCATCTCTCACCGGTTCAGCTCTCCAATTAACCCGAACCGGTCAATTACTCTTAACCCAAAACGACACCGTTTTATGGCAAACGAAAAACACTCATGAATCTCTTCCTCAACTGAATCTTTTAGAAAACGGAAATTTAGTTCTGGAGACTAAAAACGGTGTCGTTTTATGGCAAAGTTTTGATGAACCAACTGACACGTGGCTACCAGGTATGAACTTAACTAGGGTTCATAACTTACTGTCGTGGCGCACGTTAACAAATCCTGGTAATGGTTTTTATTCACTGCGGTTAAAACCACCGAACTACGGTGAATTTGAGCTTGTTTTTAATGGCACCGTTTCGTATTGGGACACCGGTAAATGGACTGGTGGAGCATTTACCGGTGTTCCTGAGATGATGGTGCCTATTTATAGATTTGATTTTGAAGATGCTTATTCGCCAATGGCGTCGTTCGGATTCACCGAACGAGCTTTGGATAACGGTGTTAGACCGCCTACGATGTTTAGAGTTGAGCCGTTTGGGCAGATGAGGCAGTATACGTGGTCGAGTCAGGCGGGTTCGTGGAATATGTTTTGGTCTAGACCGGAGTCGATTTGTTCGGTTAAGGGTGTTTGTGGGAGGTTTGGTGTTTGTGTTGGTGAGGTTTTAAGGGTTTGTGAGTGTGTTAAGGGTTTTGTGGCGGTGGATGGTGGTGGATGGGGTTCGGGGGATTATTCGGGTGGGTGTTGGAGAGGGGAGAGGGTTTGTGATGATAGTGATGGTTTTGAGGATTTTGGTGTTGTTAGGTTTGGTTTTGAGAATATGAGTAGTTTTAAGGCTAAATCTAGGAGTTTGTGTGAGCGTGGCTGTTTGAATTCTTGTGATTGTGTTGGTTTGAGTTTTGATGAAAAGAGTGGGTTTTGTAGGAATTTTTTTGGGTCTCTTTTTGATTTTCAAAATTTGACTACTTTGGAGAGTGGTGGTGGTGGTGGGAATGGGAATGTGTTGTATGTTAGGGTTCCTGGTGAGGTATCCGAGGGGAAGATTAAAAGGTGGAATGGTAAGGTTTTGAGCGGTGTTGTTATTGGATGTGTTTTGTTTTTGGTTTTGGTTTTGGGTGTGGTTGTGGTGACTTTGGTGGTGTTGGCAAAGAGGAAGCGATTGAAGAAGGAGAATGGGTTGGAGGAAGATGGGTTTGTTCCTGTGTTGAATTTGAAGGTGTTTTCTTACAAGGAGCTTCAATTGGCGACTCGAGGGTTTTCTGAGAAACTTGGGCATGGTGGGTTTGGGACGGTGTTTCAAGGGGAGTTGAGTGATTCTACGGTTGTTGCTGTGAAGCGTTTGGAGAGGCCGGGAGGTGGAGAGAAAGAGTTTAGGGCCGAGGTTTCAACGATTGGGAACATTCAGCATGTTAATCTTGTGAGATTAAGAGGCTTTTGCTCTGAGAATGCACATCGACTTTTGGTTTATGAGTACATGTCCAATGGTGCCCTTAGCGCTTATCTGCGAAAGGAGGGGCCTTGTTTGAGCTGGGATGTTAGGCTCAGGGTAGCAATAGGAACTGCTAAAGGCATAGCATATTTACATGAAGAATGTAGAAGTTGCATTATACATTGTGATATCAAACCTGAAAACATTCTTTTGGATAGTGATTTCACCGCCAAGGTTTCTGATTTTGGATTGGCAAAGCTAATTGGTAGGGACTTCAGCAGGGTGTTGGTAACCAGGAGAGGCACTTTGGGATATGTAGCACCGGAGTGGATTTCTGGCGTTGAAATTACTACTAAAGCTGATGTTTACAGCTATGGAATGACATTACTAGAACTTGTAGGCGGTCGTCGGAATGTTGAGGCACCACCTTCGTCTGGTGATAGAAAGAGTGGTTGTGAGACAGAAGACAAATGGTTCTTTCCTCCATGGGCAGCGCAGCTGATAATCGATGATAATGTGGCCGCTGTGGTTGATAAGAAGCTTGGAAATGTATATAACATTGAGGAGGCTAAGAGGGTTGCTCTGGTAGCAGTTTGGTGCATTCAGGATGATGAGGCAATGAGACCTACCATGAGTATGGTGGTAAAAATGTTAGAAGGGTTGGTGGAGGTGGCTCTTCCACCGCCGCCTAAGTTGCTACAAGCATTGGTTACCGGAGAGTCCTTTCGTGGTGTCAAGGTTGATTCGAGTAATGCGGTTTCTACCGCTGGCAGTTCATCTTTCTGCGACAACATGGAAGTATCAGTCGCTGATTCAGAATCATGTATAGGAGAAGTTTTTTCCCCACCGGATGGCATTGTCAATGTTCGATAA 2508 0.4418 MFLLFLFLLLPHFTLSNTIILSQNQTLLSQNQTFQLGFFNLEQQNNQQPRYYLSIRFTSLPSPNIIWVANRNKPISSLTGSALQLTRTGQLLLTQNDTVLWQTKNTHESLPQLNLLENGNLVLETKNGVVLWQSFDEPTDTWLPGMNLTRVHNLLSWRTLTNPGNGFYSLRLKPPNYGEFELVFNGTVSYWDTGKWTGGAFTGVPEMMVPIYRFDFEDAYSPMASFGFTERALDNGVRPPTMFRVEPFGQMRQYTWSSQAGSWNMFWSRPESICSVKGVCGRFGVCVGEVLRVCECVKGFVAVDGGGWGSGDYSGGCWRGERVCDDSDGFEDFGVVRFGFENMSSFKAKSRSLCERGCLNSCDCVGLSFDEKSGFCRNFFGSLFDFQNLTTLESGGGGGNGNVLYVRVPGEVSEGKIKRWNGKVLSGVVIGCVLFLVLVLGVVVVTLVVLAKRKRLKKENGLEEDGFVPVLNLKVFSYKELQLATRGFSEKLGHGGFGTVFQGELSDSTVVAVKRLERPGGGEKEFRAEVSTIGNIQHVNLVRLRGFCSENAHRLLVYEYMSNGALSAYLRKEGPCLSWDVRLRVAIGTAKGIAYLHEECRSCIIHCDIKPENILLDSDFTAKVSDFGLAKLIGRDFSRVLVTRRGTLGYVAPEWISGVEITTKADVYSYGMTLLELVGGRRNVEAPPSSGDRKSGCETEDKWFFPPWAAQLIIDDNVAAVVDKKLGNVYNIEEAKRVALVAVWCIQDDEAMRPTMSMVVKMLEGLVEVALPPPPKLLQALVTGESFRGVKVDSSNAVSTAGSSSFCDNMEVSVADSESCIGEVFSPPDGIVNVR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03778 835 Pfam Protein kinase domain 489 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03778 835 FunFam S-receptor-like kinase 5 561 772 - -
Mepo1g03778 835 CDD B_lectin 20 138 IPR001480 -
Mepo1g03778 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Mepo1g03778 835 Pfam S-locus glycoprotein domain 191 302 IPR000858 GO:0048544
Mepo1g03778 835 FunFam Receptor-like protein kinase 4 448 560 - -
Mepo1g03778 835 PIRSF SRK 1 818 IPR024171 GO:0004674
Mepo1g03778 835 ProSiteProfiles Bulb-type lectin domain profile. 12 136 IPR001480 -
Mepo1g03778 835 ProSiteProfiles PAN/Apple domain profile. 324 390 IPR003609 -
Mepo1g03778 835 Gene3D Transferase(Phosphotransferase) domain 1 561 770 - -
Mepo1g03778 835 PANTHER OS07G0415500 PROTEIN 14 776 - -
Mepo1g03778 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 51 196 IPR036426 -
Mepo1g03778 835 ProSiteProfiles Protein kinase domain profile. 486 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03778 835 SMART blect_4 18 138 IPR001480 -
Mepo1g03778 835 SUPERFAMILY Protein kinase-like (PK-like) 469 764 IPR011009 -
Mepo1g03778 835 SMART serkin_6 486 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03778 835 Pfam D-mannose binding lectin 65 151 IPR001480 -
Mepo1g03778 835 Gene3D Phosphorylase Kinase; domain 1 459 560 - -
Mepo1g03778 835 CDD STKc_IRAK 492 766 - -
Mepo1g03778 835 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Mepo1g03778 835 Gene3D - 12 135 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03778 Mepo-Chr1 43987376 43990396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03778 476 773 Receptor kinase-like Gene Family AT5G20050 46.945 1.23e-79 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mepo1g03778 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03778 - - lja:Lj0g3v0252549.1 1160.59