Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03766 ATGGCATCATCTGTTTCTTCTTCAGAACGGTTTTTATCATCTGAAAGTGGAAGGAGCATGATCCCAAATTTGACTAGTGATGGCAATGAGAGTTTGTTGGACTTGAAAATGAGTTACCTGTCTAGTATTAAAGAAGAAAATCTTTGTCATCCATCACCTCCTAGTGTGCTGGATAGAGGAATGGACGATAGTGTGTATGATCAACTTGAACAGGCTATCGCGGAGGCTGAGAAGGCTAGATGGGATGCGTATCAAGAAACTGTTAGGCGTCGCAAAGCTGAAAAAGATGTCATTGATACTATACGCAAGACTAAAGACACCATAATCTTGTATGAAGAAGAGGTAAAACTAAGGAAAGAGTTAGAGGAAGCACTACAGAAAGCGAAAGAAGAAATTGACAACATGAAAAGCAAATTAGACAAAGTCAATAAGGAACTCCAACTTGCCTTGAATCACAAGTCATCAAAGGAGAATCAAATTAGTGAGACATCAAGAACACATACCCTTCAACTTTTGTCAGAGTTTTCTTTTTCTGAGATTGAAGAAGCAACATGTAACTTCAATCCATCCTTAAAGATTGGTGAAGGTGGATACGGAAAGATATTTAAAGGTATCCTTCGTCACACTGAGGTGGCTATAAAAATGTTGAGCCCCAACAGCACTCAAGGAGCTTCAGAATTTCAACAGGAGGTTGAAGTATTGAGCAAGTTAAGGCATCCAAATCTTATCACACTTATAGGAGTAAACCAAGAATCAAAAACTCTTATCTATGAGTATTTACCAAATGGAAGCCTTGAAGATCATCTCAGCCGCAATGGAAATAATAACACACCTCCATTAACATGGCAGACTCGCATTCGCATTGCGACAGAACTATGTTCTGCTCTCATATTTCTCCATTCCAATAAACCTCACAGCATAGTCCATGGCGACTTAAAACCTTCCAACATTCTCCTTGATGCAAAGTTTGTAACCAAGCTTAGCGACTTTGGAATCTGTCGTGTATTATCTTGTCAAAACGATTCTTCTAGTAGCAATAGTACTACACAGTTTTGGATCACTAGTTGTGCAAAGGGAACTTTTGCATACATGGATCCCGAGTTCTTAGGTACAGGTGAACTTACTTCGAAGTCAGATGTTTATTCATTTGGAATTGTTTTGTTAAGATTGATAACTGGAAAACCAGCTTTAGGAATAAAGAATGAAGTGTTATATGCATTAAATAATGCTGGTGGAAATGTGAAATCACTTTTGGATCCTTTGGCTGGAAATTGGCCTATTGTGGAAGCTGAAAAGCTGGTTGATTTTGCTTTGAGGTGTTGTGATATGAACAAAAAGAGTAGGCCAGAGCTTTGTTCAGAAGGTTGGAGGGTGTTGGAACCAATGAAGGCTTCTTGTAGTGGCACAAACAACTTTGGACTTAAGTCCTGTTTGGACAAACAGCTTAATAGGACGACTTAA 1461 0.3881 MASSVSSSERFLSSESGRSMIPNLTSDGNESLLDLKMSYLSSIKEENLCHPSPPSVLDRGMDDSVYDQLEQAIAEAEKARWDAYQETVRRRKAEKDVIDTIRKTKDTIILYEEEVKLRKELEEALQKAKEEIDNMKSKLDKVNKELQLALNHKSSKENQISETSRTHTLQLLSEFSFSEIEEATCNFNPSLKIGEGGYGKIFKGILRHTEVAIKMLSPNSTQGASEFQQEVEVLSKLRHPNLITLIGVNQESKTLIYEYLPNGSLEDHLSRNGNNNTPPLTWQTRIRIATELCSALIFLHSNKPHSIVHGDLKPSNILLDAKFVTKLSDFGICRVLSCQNDSSSSNSTTQFWITSCAKGTFAYMDPEFLGTGELTSKSDVYSFGIVLLRLITGKPALGIKNEVLYALNNAGGNVKSLLDPLAGNWPIVEAEKLVDFALRCCDMNKKSRPELCSEGWRVLEPMKASCSGTNNFGLKSCLDKQLNRTT 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03766 486 ProSiteProfiles Protein kinase domain profile. 187 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03766 486 SUPERFAMILY Protein kinase-like (PK-like) 167 450 IPR011009 -
Mepo1g03766 486 Gene3D Phosphorylase Kinase; domain 1 156 259 - -
Mepo1g03766 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Mepo1g03766 486 Coils Coil 111 159 - -
Mepo1g03766 486 PANTHER OS02G0152300 PROTEIN 12 464 - -
Mepo1g03766 486 SMART serkin_6 187 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03766 486 ProSitePatterns Protein kinases ATP-binding region signature. 193 214 IPR017441 GO:0005524
Mepo1g03766 486 Coils Coil 66 86 - -
Mepo1g03766 486 Gene3D Transferase(Phosphotransferase) domain 1 260 466 - -
Mepo1g03766 486 MobiDBLite consensus disorder prediction 1 27 - -
Mepo1g03766 486 Pfam Protein kinase domain 191 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03766 486 FunFam receptor-like protein kinase FERONIA 150 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03766 Mepo-Chr1 43833532 43835706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03766 60 474 U-box Gene Family AT2G45910 50.108 7.23e-151 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mepo1g03766 Pkinase 2.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03766 - - tpra:123883511 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02146 3 31011671 31017944 Mepo1g03766 1 43833532 43835706 PCT