Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03739 ATGGATCGAGGGGACCAAATGGCGGCATTATCCGGTTCTGCATCATACTTTATGCAGAGAGGATTACCTGGTTCTGGAAACCAACATGAGTTGCATAATTCGCCTGGTATTCGTCCACTGAATACTAATTCATCGTTTCAATCAAGTATTGGTGGTGGTGGTACTATTGGATCCACGTTGCCGATGGATTCTTCTGGAATTGGATCTCAATGTATCAATGTAGGTGCTCCTTCTGGGGGTGCTGCTTCAACCGGTGAACCTGCCAAAAGGAAGCGTGGAAGGCCTAGAAAATATGGGGCAGATGGAAGTGTGTCATTAGCATTGACTCCAACAACACCAGCAAGCCATCCTGGAACCGTACCGCAAGTCCAGAAACGCGGTAGAGGGCGCCCTCCAGGGTCCGGGAAAAAACAACAGTTGGCTTCTTTCGGTGGTTTGATCTCTAGTTCAGCTGGAAATGGTTTCACTCCTCATGTCATCTCCATTGCAATTGGAGAGGACATTGCAACAAAAATTCTGGCATTTTCTCAGCAGGGACCTAGAACTATATTTGTTATGTCGGCCAATGGTGCTGTCTCTACCGTGACGCTTTGTCAGGCTTCGACATCTGGGGGTTCTGTCACATATGAGGGGCGTTTTGAGATACTAAGCCTGACAGGCTCTTACTTGGTTGCTGATAATGATGGCTCGCGTAATCGAACGGGTTCATTAAGTGTTTCTCTTGCCAGTCCTGATGGTCGTGTCATTGGTGGAGGCGTCGGTGGATTGCTCATTGCTGCAAGTCCTGTTCAGGTGATAATCGGGAGCTTTATGTGGGGTGGACCAAAAACCAAGAACAAGAAGAATGAAGATTCAGAAGGTCAAGAACTTGGTATAGAGGAAAATCATCATCATGGAGTTCATAATCCAGTTGCAATGAATAGCATTTCACCAAATCAAAGTCTGACTCCAACATCTCTCAATTCTTGGCCTGCATCGCGTCCATTGGATATGCGTAATTCCCATATCGACATTGATTTAATGCGTGGGTGA 1032 0.4651 MDRGDQMAALSGSASYFMQRGLPGSGNQHELHNSPGIRPLNTNSSFQSSIGGGGTIGSTLPMDSSGIGSQCINVGAPSGGAASTGEPAKRKRGRPRKYGADGSVSLALTPTTPASHPGTVPQVQKRGRGRPPGSGKKQQLASFGGLISSSAGNGFTPHVISIAIGEDIATKILAFSQQGPRTIFVMSANGAVSTVTLCQASTSGGSVTYEGRFEILSLTGSYLVADNDGSRNRTGSLSVSLASPDGRVIGGGVGGLLIAASPVQVIIGSFMWGGPKTKNKKNEDSEGQELGIEENHHHGVHNPVAMNSISPNQSLTPTSLNSWPASRPLDMRNSHIDIDLMRG 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03739 343 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 61 318 IPR039605 GO:0003680
Mepo1g03739 343 MobiDBLite consensus disorder prediction 19 140 - -
Mepo1g03739 343 Pfam Plants and Prokaryotes Conserved (PCC) domain 157 270 IPR005175 -
Mepo1g03739 343 MobiDBLite consensus disorder prediction 105 119 - -
Mepo1g03739 343 Gene3D - 157 301 - -
Mepo1g03739 343 SUPERFAMILY AF0104/ALDC/Ptd012-like 153 274 - -
Mepo1g03739 343 FunFam AT-hook motif nuclear-localized protein 1-like 157 288 - -
Mepo1g03739 343 MobiDBLite consensus disorder prediction 300 323 - -
Mepo1g03739 343 MobiDBLite consensus disorder prediction 19 72 - -
Mepo1g03739 343 ProSiteProfiles PPC domain profile profile. 152 293 IPR005175 -
Mepo1g03739 343 CDD DUF296 156 270 IPR005175 -
Mepo1g03739 343 SMART AT_hook_2 125 137 IPR017956 GO:0003677
Mepo1g03739 343 SMART AT_hook_2 89 101 IPR017956 GO:0003677
Mepo1g03739 343 MobiDBLite consensus disorder prediction 305 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03739 Mepo-Chr1 43599046 43606492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03739 1 343 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 49.863 1.67e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03739 - - gmx:100799791 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03739 1 43599046 43606492 Mepo1g03739 1 43599046 43606492 ECH
Mepo3g02129 3 30737084 30744461 Mepo1g03739 1 43599046 43606492 PCT