Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03726 ATGGGAAGAACACCTTGTTGTGATAACAAAATGGGGTTGAAGAAAGGTCCATGGACTAGTGAAGAAGATGAAGTTCTTGTTAATTATATCAAGAAAAATGGTGGTCATGGAAGCTGGCGTTCTCTTCCTAAGTTAGCAGGCCTTCTTCGTTGCGGTAAGAGTTGCCGGCTAAGATGGACAAACTACCTAAGACCTGATATTAAACGCGGTCCCTTTACACCTGAGGAAGAAAAACTAGTCATACAGCTTCATGCCATCCTTGGAAACAGGTGGGCTTCAATAGCCTCTCAGCTACCAGGAAGAACTGACAATGAGATCAAGAATTTATGGAACACACACTTAAAGAAACGTCTCATATGCATGGGAATTGATCCACAAACTCATGAACCAATAGCCTCGTCACATTATTTCCCAATTTCCAAATCAAATTCGTCTATCGCCACACGCCACATGGCTCAATGGGAAAGTGCAAGACTTGAAGCAGAAGCAAGGCTCTCAAAAGACACATCTTTATTCAACAATAACAACATTCCTTCTTTGGCAAGTAACAAAGCTGATTCTGACTATTTCCTTAAGATATGGAACTCTGAAGTTGGACAATCTTTTCGCACCGGTCGCAAATCAGATGACGAGGACGATGATGATAAAACTAAGTGCCAAAGTTCAATGTCTCAAGAAGGGTCATCTTGTAATAACAACAACAAATGTGGATCAGTTTCTGTTACTACTACAACAAGCAATGTGATGGAGGATTTTGAATGGAGAAACTACAAGTCATTTGATGTAGGTTATGATGATTCATCAAGCTCTAATGATCTTGAAGACTCATCTGACACTGCACTGCAACTCTTGTTGGATTTTCCTTCTAACAATGACATGAGCTTCTTAGAATGA 894 0.4027 MGRTPCCDNKMGLKKGPWTSEEDEVLVNYIKKNGGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFTPEEEKLVIQLHAILGNRWASIASQLPGRTDNEIKNLWNTHLKKRLICMGIDPQTHEPIASSHYFPISKSNSSIATRHMAQWESARLEAEARLSKDTSLFNNNNIPSLASNKADSDYFLKIWNSEVGQSFRTGRKSDDEDDDDKTKCQSSMSQEGSSCNNNNKCGSVSVTTTTSNVMEDFEWRNYKSFDVGYDDSSSSNDLEDSSDTALQLLLDFPSNNDMSFLE 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03726 297 MobiDBLite consensus disorder prediction 203 220 - -
Mepo1g03726 297 SMART sant 68 116 IPR001005 -
Mepo1g03726 297 SMART sant 14 65 IPR001005 -
Mepo1g03726 297 CDD SANT 17 63 IPR001005 -
Mepo1g03726 297 MobiDBLite consensus disorder prediction 221 237 - -
Mepo1g03726 297 FunFam MYB transcription factor 71 118 - -
Mepo1g03726 297 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 255 - -
Mepo1g03726 297 FunFam Myb transcription factor 12 69 - -
Mepo1g03726 297 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Mepo1g03726 297 SUPERFAMILY Homeodomain-like 11 110 IPR009057 -
Mepo1g03726 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Mepo1g03726 297 CDD SANT 71 114 IPR001005 -
Mepo1g03726 297 MobiDBLite consensus disorder prediction 202 237 - -
Mepo1g03726 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 63 IPR017930 -
Mepo1g03726 297 Pfam Myb-like DNA-binding domain 15 63 IPR001005 -
Mepo1g03726 297 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Mepo1g03726 297 ProSiteProfiles Myb-like domain profile. 10 63 IPR001005 -
Mepo1g03726 297 Gene3D - 71 118 - -
Mepo1g03726 297 Gene3D - 12 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03726 Mepo-Chr1 43488324 43491244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03726 1 297 MYB Transcription Factor Family AT3G61250 62.252 2.59e-122 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo1g03726 Myb_DNA-binding 1.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03726 K09422 - gmx:100816569 395.201