Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03706 ATGGCGACTCAGATCAACCAACCAACGAGGCTACGGTGGGGAGAATTGGAGGAAGACGACGACGGAAACGATCTCGATTTCCTGTTACCGCCGCGTCAGGTAATCGGACCAGACGAAAACGGAATCAAGAAAGTGATTGAATACAAATTTGATGAAGATAATAATAAGGTTAAGATCACAACCGTTACTCGCACAAGGAAACTGGCTAGCGCGCGTGTTAGTAAACGCGCTGTTGAACGACGTGAATGGTCGAAATTTGGTGATGCTGTGAATGAAGATGTTGGTAGTCGTCTTACTGCTGTTTCGACTGAAGAGATTGTTCTTGAACGCCCTAAGCCTATTGGTTCCACAAATGAGCCACAGCGGCCTAGTGACCCAGATGCTGTTCTCATGGTATGCAGGACTTGTGGGAAGAAGGGTGACCATTGGACTGCAAGGTGTCCAATTAAGAATTCCTTACAACCGGCTGACGAATTCGTTGATAAGCCTTCAGCAGCAGCACCTGTTTCAACTAACAATGCATATGTACCTCCTAGCTTGAGAGCTGGTGCAGATAGGACTGGAGGGTCAGACATGAGGCGGAGGAATGATGAGAATTCTGTTCGGGTAACCAATCTCTCGGAGGACACGAGGGAGCCTGATTTGCATGAGCTTTTCGGCACTTTTGGTTCTGTGAGCAGAGTATATGTTGCTATGGATAAAAACACTGGCACGAGTAGGGGTTTTGGCTTTGTCAACTTTGTCAACAGGGATGACGCTCAGAGAGCTATTAACAAACTCAATGGCTATGGCTACGACAATCTCATCCTGAAGGTTGAATGGGCCACCCCAAGAACAACCTAA 843 0.4721 MATQINQPTRLRWGELEEDDDGNDLDFLLPPRQVIGPDENGIKKVIEYKFDEDNNKVKITTVTRTRKLASARVSKRAVERREWSKFGDAVNEDVGSRLTAVSTEEIVLERPKPIGSTNEPQRPSDPDAVLMVCRTCGKKGDHWTARCPIKNSLQPADEFVDKPSAAAPVSTNNAYVPPSLRAGADRTGGSDMRRRNDENSVRVTNLSEDTREPDLHELFGTFGSVSRVYVAMDKNTGTSRGFGFVNFVNRDDAQRAINKLNGYGYDNLILKVEWATPRTT 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03706 280 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 10 279 IPR017334 GO:0003743|GO:0005737|GO:0005852
Mepo1g03706 280 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 15 276 - -
Mepo1g03706 280 Pfam Eukaryotic translation initiation factor 3 subunit G 33 152 IPR024675 -
Mepo1g03706 280 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 199 277 IPR000504 GO:0003723
Mepo1g03706 280 SMART rrm1_1 200 273 IPR000504 GO:0003723
Mepo1g03706 280 MobiDBLite consensus disorder prediction 1 24 - -
Mepo1g03706 280 PIRSF Transl_init_eIF-3_RNA-bind 2 280 IPR017334 GO:0003743|GO:0005737|GO:0005852
Mepo1g03706 280 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 201 267 IPR000504 GO:0003723
Mepo1g03706 280 CDD RRM_eIF3G_like 200 275 IPR034240 -
Mepo1g03706 280 Gene3D - 161 280 IPR012677 -
Mepo1g03706 280 SUPERFAMILY RNA-binding domain, RBD 185 279 IPR035979 GO:0003676
Mepo1g03706 280 MobiDBLite consensus disorder prediction 169 199 - -
Mepo1g03706 280 FunFam Eukaryotic translation initiation factor 3 subunit G 163 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03706 Mepo-Chr1 43202583 43204521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03706 9 280 Eukaryotic Initiation Factors Gene Family AT3G11400 61.587 2.15e-132 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03706 K03248 - gmx:100818725 415.616