Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03687 ATGGAGGAAGAGAATAAAGAAATCAAATCATTTAAGGATCTTGGCTTAGATGAGTTATTAGTGGAAGCTTGTGAAAAAATGGGTTGGAAGAATCCTAAAGAGATTCAACTAAAAGCAATTCCGCAAGCACTACAAGGAAAAGATGTCATTGGGTTTTCCCAAACTGGTTCTGAATTGCCGACCGACCCCGCTTCCCAGAAGAAGGTCCTCCATCAAAATATCACTCTATGTCAAGCACACTTAACTATGAAGGAGCTTGCATATCAAATTGCTGAACAGTTTGAAGCTCTAGGTTCTGAATTTGGTGTCAAGTGTGCTGTGCTTGTTGGACAGATGGACATGGTACAACAATCTATCGAGATTGGAAAAAGACCTGATATTATCGTTGGGACGCCTGGACGAGTCTTGGATCACCTAAAAAACACCAAAGGATTTTCTTTTGATAGATTAAAATACTTGGTCTTAGATGAGGCAGACAGGCTGTTGAGTGAGGACTTTGAGAAATCACTTACTGAGTTTTTAGGATTAATTCCTTGTGAGCGAGAGTTTCTATTTCAGGTCAAGAGGCTTGGAAAGGTTCATTTAAGGAACCCTGTGAAGATTCAAGTATCAACCGAGAATTCTACTGTGGACACACTGAAACAGGAGCTTCTCTTTGTGCCAAAAGATCATCAGGATTGTTACCATGTATACATTCTCACTGAAATGGCCGGAAGTACATCAATGGTATTCACTCAGAGAACTGAGTCAACGCGGCTTCTAGCTTTGATGCTTAGGAATCTTGGTTTGAAAACCATCCCAATTAATGGTTGTATGAGTCAGTTAAGTCCTATACTTGGAGCCTTGAAGAAGTTCAAGTCTGGGGAGTGCAATATTCTCCTTTGTACTGACATAGCAAGTAGGGGACTCGATATTCCGGCAGTAGATATGGTGATTAACTATGACATTCCCCAAAACCCCAAAAATTATATACATCGTGTGGGAAGGACCGCTCGTGCAGGGCGCTCTGGTGATGCCATTTCCCTTGTGAACCAATATACAATAGAATGGTACAACCACATAGAGGATCTTATAGGTGAGGAACAAGAAACTACCGGTGTATCCTGCAGATCAAATGAAGTTTTGCTTTTGAAAGATCGTGTTAATGATGCCAAAAGATTGGCAGAAAAGAAAATAAAGGAATCTGTTGGGGTGGAGAAACGGAGGGGAGGAGGAGATTATGGTGAGGAAGAGGAGGAGATTGACAAGTACTTGGGTCTCATAAATAAAAGATAA 1275 0.4102 MEEENKEIKSFKDLGLDELLVEACEKMGWKNPKEIQLKAIPQALQGKDVIGFSQTGSELPTDPASQKKVLHQNITLCQAHLTMKELAYQIAEQFEALGSEFGVKCAVLVGQMDMVQQSIEIGKRPDIIVGTPGRVLDHLKNTKGFSFDRLKYLVLDEADRLLSEDFEKSLTEFLGLIPCEREFLFQVKRLGKVHLRNPVKIQVSTENSTVDTLKQELLFVPKDHQDCYHVYILTEMAGSTSMVFTQRTESTRLLALMLRNLGLKTIPINGCMSQLSPILGALKKFKSGECNILLCTDIASRGLDIPAVDMVINYDIPQNPKNYIHRVGRTARAGRSGDAISLVNQYTIEWYNHIEDLIGEEQETTGVSCRSNEVLLLKDRVNDAKRLAEKKIKESVGVEKRRGGGDYGEEEEEIDKYLGLINKR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03687 424 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 154 162 IPR000629 -
Mepo1g03687 424 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 212 381 IPR001650 -
Mepo1g03687 424 SMART ultradead3 28 216 IPR014001 -
Mepo1g03687 424 Pfam Helicase conserved C-terminal domain 232 334 IPR001650 -
Mepo1g03687 424 Pfam DEAD/DEAH box helicase 34 178 IPR011545 GO:0003676|GO:0005524
Mepo1g03687 424 Gene3D - 1 58 IPR027417 -
Mepo1g03687 424 Gene3D - 210 373 IPR027417 -
Mepo1g03687 424 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 9 37 IPR014014 GO:0003724
Mepo1g03687 424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 355 IPR027417 -
Mepo1g03687 424 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 40 176 IPR014001 -
Mepo1g03687 424 Gene3D - 81 209 IPR027417 -
Mepo1g03687 424 PANTHER RNA HELICASE 5 376 - -
Mepo1g03687 424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 57 IPR027417 -
Mepo1g03687 424 CDD SF2_C_DEAD 213 343 - -
Mepo1g03687 424 SMART helicmild6 252 334 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03687 Mepo-Chr1 42905858 42911354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03687 9 345 Eukaryotic Initiation Factors Gene Family AT3G13920 30.747 2.30e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03687 K14777 - gmx:100775796 508.449