Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03683 ATGCCTCGTGGAACGCTTGAAGTTGTTTTGATCAGTGCCAAAGGCCTTGAAGACAATGATTTTCTCTCTAGCATAGATCCTTATGTGATCCTCACTTACAGGGCACAGGAGCACAAGAGTACTGTGCAAGAAGGTGCTGGATCCAACCCTCAATGGAATGAGACATTTCTTTTCACTGTTTCTGATACTGCTTCTGAGCTCAATCTAAAGATAATGGAAAAGGACAACTATAGTGCTGATGATAATCTTGGAGAAGTAATAATTCCTTTAGAGACAGTGATTCAAGAGGGTAGCGTTCCAGAGAATTCTTACAAACTTGTGAAGGATGAAAAATATTGTGGAGAGGTTAAGGTGGCTCTCACTTTTACACCTGAGAGAAACTATGATCGAAGTTACAATGAAGAGGAGACTGGTGGATGGAAACAATCGGCTAGGGACTTTTGA 444 0.4122 MPRGTLEVVLISAKGLEDNDFLSSIDPYVILTYRAQEHKSTVQEGAGSNPQWNETFLFTVSDTASELNLKIMEKDNYSADDNLGEVIIPLETVIQEGSVPENSYKLVKDEKYCGEVKVALTFTPERNYDRSYNEEETGGWKQSARDF 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03683 147 MobiDBLite consensus disorder prediction 128 147 - -
Mepo1g03683 147 Pfam C2 domain 4 106 IPR000008 -
Mepo1g03683 147 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 126 IPR035892 -
Mepo1g03683 147 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Mepo1g03683 147 PANTHER C2 DOMAIN-CONTAINING 1 136 - -
Mepo1g03683 147 Gene3D C2 domain 2 125 IPR035892 -
Mepo1g03683 147 SMART C2_3c 5 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03683 Mepo-Chr1 42873215 42875220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03683 4 94 C2H2 Transcription Factor Family AT4G21160 35.165 2.21e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03683 - - gmx:100500006 224.557