Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03671 ATGAATATGATGAGAAGACTCAAGAGCATTGCTTCTGGAAGAACTTCTATTTCTTCAGATCCTGGAGGGGATTCTAATTCGAAAAGAGTTAAGCTTGATCAAGAAACTGAGAAGGATATAGAAGCAACTACAGTGAGTGGAAATGGAACAGAAACAGGCCAAATTATTACAACCACTATTGCTGGTCGAGATGGACAACCGAAACAGACAATCTCATACATGGCCGAACGTGTAGTTGGGACTGGCTCTTTTGGCGTTGTTTTTCAGGCCAAGTGCCTTGAAACCAATGAAGCAATTGCCATAAAAAAGGTGCTGCAAGACAACAGATATAAGAATAGGGAACTCCAGATTTTACATGGATTAAATTATTTACATGAAGTGATAGGCGTCTGTCATCGAGACATCAAACCTCAGAACCTATTGGTCAATCCACAAACACATCAGTTAAAGTTATGTGATTTCGGGAGTGCAAAGATGTTGGTGCCCGGTGAACCCAACATATCATACATATGCTCTAGATATTATAGAGCTCCAGAGCTAATATTTGGAGCAACTGAATACACTACTGCTATTGATATGTGGTCTGTTGGTTGTGTTTTGGCTGAGCTCCTTCTAGGACAGCTTTTTCACAAGAGAATGCCATCTGAAGCAGTGGATCTAGTTTCAAGGTTGCTTCAGTATTCACCACATCTACGTTGCACCGCTTTGGCTGCATGTGCACATCCATTCTTCAACGATCTGCGAGACCCAAATGCAAGCTTACCAAATGGGCAACCATTACCTCCATTGTTCAACTTCACGCCTCAAGAACTAGTAAATGCACCTGAAGATTTGCGTCAACGTCTCATTCCCGAACATGCAAGGAGTTAA 870 0.4184 MNMMRRLKSIASGRTSISSDPGGDSNSKRVKLDQETEKDIEATTVSGNGTETGQIITTTIAGRDGQPKQTISYMAERVVGTGSFGVVFQAKCLETNEAIAIKKVLQDNRYKNRELQILHGLNYLHEVIGVCHRDIKPQNLLVNPQTHQLKLCDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSVGCVLAELLLGQLFHKRMPSEAVDLVSRLLQYSPHLRCTALAACAHPFFNDLRDPNASLPNGQPLPPLFNFTPQELVNAPEDLRQRLIPEHARS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03671 289 ProSiteProfiles Protein kinase domain profile. 1 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03671 289 SUPERFAMILY Protein kinase-like (PK-like) 72 275 IPR011009 -
Mepo1g03671 289 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Mepo1g03671 289 Pfam Protein kinase domain 105 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03671 289 MobiDBLite consensus disorder prediction 9 25 - -
Mepo1g03671 289 Gene3D Transferase(Phosphotransferase) domain 1 95 288 - -
Mepo1g03671 289 SMART serkin_6 73 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03671 289 MobiDBLite consensus disorder prediction 1 39 - -
Mepo1g03671 289 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 116 207 - -
Mepo1g03671 289 ProSitePatterns Protein kinases ATP-binding region signature. 79 103 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03671 Mepo-Chr1 42741171 42744601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03671 111 247 Core Cell Cycle Gene Families AT1G76540 34.946 2.21e-28 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Mepo1g03671 Pkinase 9.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03671 K00924 - twl:120004241 362.459