Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03668 ATGAGTTTTGGGGGGTTTGTAGAGAACAATTCAGGTGGTGGTGGAGGTGTAAGAAACATAGGAGAAATTTCTTACAACAACGAAAGAATGCCATTTGGTTCTTTCTCTCAACCTCGTCTTGTTACTTCTCCAGCTTTGGCTAAATCAATGTTCAACTCACCTGGATTATCACTTGCACTTCAAACAAATATTGATGGACAAGAAGATGTGAATGGATCAATGCATGGGAATTATGAGCAAAATGGTTTGAGAAGAAGTAGAGAAGAGGAACAAAGTAGATCTGGTAGTGATAACTTGGATGGTGTTTCTGGTGATGAACAAGATGCTGATGATAAGCCTCCTAGGAAGAAGAGATATCACCGACACACTCCTCAACAGATTCAAGAGCTTGAAAGTTTGTTTAAGGAGTGTCCTCACCCAGATGAGAAGCAAAGATTGGAACTTAGCAAAAGGCTTTGTTTGGAAACAAGACAAGTTAAGTTTTGGTTCCAAAATCGAAGAACACAAATGAAGACTCAATTGGAAAGGCATGAGAACAATCTGCTTAGGCAAGAGAATGATAAGCTTAGAGCTGAGAATATGTCTATAAGGGATGCAATGAGGAATCCTATTTGTTCAAATTGTGGAGGTCCAGCTATGATCGGCGAGATTTCACTTGAGGAACAACACCTTCGAATTGAGAATGCGAGGTTGAAAGATGAGCTAGACCGAGTTTGTGCACTTGCCGGAAAGTTTCTAGGCCGTCCGATTTCTTCGTTACCAAATTCAAGTTTAGAGCTTGGTGTTGGAGGAAACAACAACAATGGTTTTAATGTGATGAATAATGTGCCTTCAACATTACCTGATTTTAGTTCAGGAATGTCTAATAACCCTTTAGCCATTGTGTCTCCTTCAAATAGACAAACATCTATGGTGACTACTGGCTTTGATAGATCGGTCGAAAGGTCTATGTTTCTTGAACTTGCTTTGGCTGCTATGGATGAGTTGGTTAAGATGGCACAAACTAGTGACCCTCTTTGGATTAGGAGTATAGAAGGAGGAAGGGAAATTTTGAACCATGAGGAATATTTGAGGACATTCACTCCTTGCATTGGTTTGAAACCTAATGGTTTTGTTTCTGAGGCCTCAAGGGAAACTGGTACTGTCATCATCAATAGCTTGGCCCTTGTCGAGACTCTTATGGATTCGAATCGATGGATAGAGATGTTTCCTTGTATCATTGCTAGAACCTCCACAAATGAAGTGATATCTAATGGAATAAATGGAACAAGAAATGGTGCACTTCACCTAATGCAAGCTGAACTCCATGTGCTATCGCCTTTGGTTCCGGTTCGCGAGGTAAATTTCCTTAGGTTTTGCAAGCAGCATGCAGAAGGGGTTTGGGCTGTTGTTGACGTGTCTGTAGATACCATCAGAGAAACTTCTGGTGCTACAAGTTTTGTGAACTGTAGGAAGCTTCCCTCTGGTTGTGTTGTGCAAGATATGCCAAATGGTTACTCCAAGGTGACATGGGTGGAACATACAGAATATGAGGAAAATCAAGTCCACCAGCTGTATAGACCTTTGTTGAGCTCAGGTATGGGGTTTGGCGCGTCTCGTTGGATCGCTACCCTACAACGCCAGTGTGAGTGCCTTGCCATATTAATGTCCTCTGCCGCTCCCTCTCGAGACCACTCTGCAATAACAGCAGGAGGAAGGCGAAGCATGCTGAAGCTAGCACAGCGAATGACTAACAACTTCTGTGCCGGGGTCTGTGCCTCCACAGTCCACAAATGGAACAAGCTTAACCCCGGCAATGTAGACGAAGATGTGAGGGTGATGACACGGAAGAGCGTCGACGATCCAGGTGAGCCACCAGGGATCGTGTTGAGCGCAGCCACGTCGGTGTGGCTCCCGGTTTCGCCTCAAAGATTGTTCGATTTTCTGCGCGATGAGAGGCTCCGTAGCGAATGGGATATACTATCTAATGGTGGTCCTATGCAAGAGATGGCTCATATTGCTAAAGGACAAGATCATGGCAACTGTGTTTCTCTTCTCCGTGCTAGTGCAATGAATTCCAACCAGAGTAGCATGCTGATACTACAAGAAACATGCATAGACGAAGCGGGGTCGCTTGTTGTCTATGCGCCGGTCGATATTCCAGCTATGCATGTTGTCATGAACGGTGGTGATTCAGCTTACGTGGCATTACTACCATCTGGGTTCGCTATTGTACCGGATGGTCCTGGGTCACGCGGACTGGAGAATGGTGACACGACCGCAAATGGAGGCGGCGAGGCGCGTGTTAGCGGGTCCCTTTTAACCGTGGCGTTTCAAATCCTTGTGAATAGTCTTCCTACAGCAAAACTCACCGTGGAATCAGTTGAAACAGTGAACAATCTCATTTCATGCACTGTTCAGAAAATCAAAGCAGCACTTCAATGTGAAAGCTGA 2433 0.446 MSFGGFVENNSGGGGGVRNIGEISYNNERMPFGSFSQPRLVTSPALAKSMFNSPGLSLALQTNIDGQEDVNGSMHGNYEQNGLRRSREEEQSRSGSDNLDGVSGDEQDADDKPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENNLLRQENDKLRAENMSIRDAMRNPICSNCGGPAMIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLPNSSLELGVGGNNNNGFNVMNNVPSTLPDFSSGMSNNPLAIVSPSNRQTSMVTTGFDRSVERSMFLELALAAMDELVKMAQTSDPLWIRSIEGGREILNHEEYLRTFTPCIGLKPNGFVSEASRETGTVIINSLALVETLMDSNRWIEMFPCIIARTSTNEVISNGINGTRNGALHLMQAELHVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDTIRETSGATSFVNCRKLPSGCVVQDMPNGYSKVTWVEHTEYEENQVHQLYRPLLSSGMGFGASRWIATLQRQCECLAILMSSAAPSRDHSAITAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNPGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNSNQSSMLILQETCIDEAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGLENGDTTANGGGEARVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03668 810 ProSitePatterns 'Homeobox' domain signature. 148 171 IPR017970 GO:0000981|GO:0006355
Mepo1g03668 810 SMART START_1 320 544 IPR002913 GO:0008289
Mepo1g03668 810 CDD START_ArGLABRA2_like 315 543 - -
Mepo1g03668 810 SUPERFAMILY Homeodomain-like 101 173 IPR009057 -
Mepo1g03668 810 MobiDBLite consensus disorder prediction 81 95 - -
Mepo1g03668 810 SMART HOX_1 114 177 IPR001356 GO:0003677
Mepo1g03668 810 MobiDBLite consensus disorder prediction 67 123 - -
Mepo1g03668 810 CDD homeodomain 115 173 IPR001356 GO:0003677
Mepo1g03668 810 ProSiteProfiles START domain profile. 311 547 IPR002913 GO:0008289
Mepo1g03668 810 ProSiteProfiles 'Homeobox' domain profile. 113 173 IPR001356 GO:0003677
Mepo1g03668 810 Coils Coil 167 199 - -
Mepo1g03668 810 Gene3D - 409 542 IPR023393 -
Mepo1g03668 810 Pfam Homeodomain 116 171 IPR001356 GO:0003677
Mepo1g03668 810 SUPERFAMILY Bet v1-like 572 803 - -
Mepo1g03668 810 FunFam Homeobox-leucine zipper protein HDG1 103 189 - -
Mepo1g03668 810 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 112 807 IPR042160 -
Mepo1g03668 810 Gene3D - 102 189 - -
Mepo1g03668 810 Pfam START domain 320 544 IPR002913 GO:0008289
Mepo1g03668 810 SUPERFAMILY Bet v1-like 313 544 - -
Mepo1g03668 810 FunFam Homeobox-leucine zipper protein GLABRA 2 320 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03668 Mepo-Chr1 42696214 42702990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03668 1 810 Homeobox Transcription Factor Family AT3G61150 65.663 0.0 1051
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo1g03668 START 3.7e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03668 K09338 - gmx:100811873 1328.92