Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03652 ATGGTGGAAGATAGCACAGTTGCTGTCACAGTTGATACATGTTCAACAGAAGAATGGTTGTTGAACTCACAAGAACTTGTTCCTATTGCTCTTACAAAAGCAAGAGAGGTAAAAGGGTTTCAAGGTAGGTGGAAAATGATCATTTCAAAATTGGAACAAGTTCCAACAAAGCTATCAGATTTATCAAGCCACCCTTGTTTTTCAAAGAATGCACTTTGCAAGGAACAGTTGCAGGCTGTGTCAAAGACACTAAGAGAAGGTATTGAATTAGCTGAGTTATGTTTGAAAGAAAAGTATGAAGGAAAACTAAGAATGCAAAGTGATCTTGATGCATTAATTGGTAAGCTTGATTTGAATTTAAAGGATTGTAGCTTGTTAACAAAAACTGGTGTTCTTGGTGAAGCTACTTTGCAATTCAATGTTTCTGGTTCTATAACAGAATCAGATATTGAAACACATTGCAATATAAAGGAGCTACTCGCGCGCCTTCAAATCGGTCATTTGGAATCGAAACACAAAGCTTTGGATAGACTTCATGATATTATGAGAGAAGATGAGAAGAATGTTTTGGCTGTTTTTTGCAGGAGCAATGTTGTTGCTTTGGTTCAGTTGCTTACAGCAACATCAACAAGGATAAGGGAGAAAACAGTTAGTATTATATGCTCTCTTGTTGAATCCGGTGGTAGCTGCGAAAATTGGTTAGTTATTGAAGGTGTTTTGCCACCTCTTATAAGGCTTGTTGAATCAGGTAGTGCTGTTGCTAAAGAAAAGGCTATTGTTTCTCTTCAAAGGTTGTCTATGACGGAAGACACAACTCGTGCAATCGTCGGGCATGGAGGGGTTCGTCCGTTAGTCGAGCTTTGTCAGATTGGTGATTCTGTTTCACAATCTGCAGCTGCATGTACTTTGAAGAATATTTCGGCTGTTCCGGAAGTGAGACAGGTTTTGGCTGAAGAAGGTGTTGTTAAGGTTATGATCAATCTTCTTAACAATGGAATGTTGTTAGGAACTAAAGAGTATGCTGCTGAGTGTCTGCAGAATCTGACTGCAAGCAATGAGAATCTGAGAAGGTCTGTTATATCAGAAGGCGGTGTTCGGAGCATTTTGGCTTATCTTGATGGTCCACTTCCTCAAGAATCTGCTGTTGGAGCATTGAGGAATCTTGTTGGATCGGTTTCGGAGGAAACTTTGGTTTCTCTTGGCTTGCTTCCTTGTTTAGTTCATGTTTTGAAATCAGGATCATTAGGTGCAAAACAATGCGCTGCGTCGGTTATATGCAGGATTTGTAGCTCAATTGAGATGAAGAAAATGTTAGGTGAAGTCGGTTGCATTCCTCTATTGATCAACATGCTTGAGGCCAAAGCAAATACTGCAAGAGAACTTGCAGCACAAGCAATTGCAAGCTTGATGATTTTGTCGCAAAATCGAAGAGAGGTTAAGAAGGATGATAAAAGCGTGCCGAATTTGGTTCAATTGCTTGATCCTAGTCCACAAAACACTGCAAAAAAATACGCCGTTTGTTGCCTCGGATCACTTTCTTCTTGTAAGAAATGTAAGAGGTTGATGATTTCATATGGAGCAATAGGGTATTTGAAGAAGCTTATTGAGATGGAGATTCCAGGAGCTAAAAAGTTGCTTGAAAGATTGGAAAGAGGGAAATTGAGAAGCTTGTTTAGCAGAAAATAA 1686 0.3938 MVEDSTVAVTVDTCSTEEWLLNSQELVPIALTKAREVKGFQGRWKMIISKLEQVPTKLSDLSSHPCFSKNALCKEQLQAVSKTLREGIELAELCLKEKYEGKLRMQSDLDALIGKLDLNLKDCSLLTKTGVLGEATLQFNVSGSITESDIETHCNIKELLARLQIGHLESKHKALDRLHDIMREDEKNVLAVFCRSNVVALVQLLTATSTRIREKTVSIICSLVESGGSCENWLVIEGVLPPLIRLVESGSAVAKEKAIVSLQRLSMTEDTTRAIVGHGGVRPLVELCQIGDSVSQSAAACTLKNISAVPEVRQVLAEEGVVKVMINLLNNGMLLGTKEYAAECLQNLTASNENLRRSVISEGGVRSILAYLDGPLPQESAVGALRNLVGSVSEETLVSLGLLPCLVHVLKSGSLGAKQCAASVICRICSSIEMKKMLGEVGCIPLLINMLEAKANTARELAAQAIASLMILSQNRREVKKDDKSVPNLVQLLDPSPQNTAKKYAVCCLGSLSSCKKCKRLMISYGAIGYLKKLIEMEIPGAKKLLERLERGKLRSLFSRK 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03652 561 Gene3D - 146 375 IPR011989 -
Mepo1g03652 561 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 238 280 IPR000225 GO:0005515
Mepo1g03652 561 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 320 364 IPR000225 GO:0005515
Mepo1g03652 561 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 16 559 - -
Mepo1g03652 561 Gene3D - 457 546 IPR011989 -
Mepo1g03652 561 Gene3D - 376 456 IPR011989 -
Mepo1g03652 561 SMART arm_5 268 308 IPR000225 GO:0005515
Mepo1g03652 561 SMART arm_5 351 390 IPR000225 GO:0005515
Mepo1g03652 561 SMART arm_5 431 471 IPR000225 GO:0005515
Mepo1g03652 561 SMART arm_5 391 430 IPR000225 GO:0005515
Mepo1g03652 561 SMART arm_5 309 350 IPR000225 GO:0005515
Mepo1g03652 561 SMART arm_5 185 225 IPR000225 GO:0005515
Mepo1g03652 561 SMART arm_5 472 514 IPR000225 GO:0005515
Mepo1g03652 561 Pfam Armadillo/beta-catenin-like repeat 271 308 IPR000225 GO:0005515
Mepo1g03652 561 SUPERFAMILY ARM repeat 152 540 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03652 Mepo-Chr1 42425900 42429727 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03652 157 480 U-box Gene Family AT3G54790 26.807 7.36e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03652 - - gmx:100809488 891.723