Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03651 ATGAAGCCAATTTTTTGTGGAAATCTGGATTTTGACGCGAGACAATCTGATGTTGAGAGACTGTTCAGAAAATATGGGAAGATTGATAGGGTGGACTTGAAGTCTGGTTTTGCTTTTATCTACATGGAAGACGAACGTGATGCCGAGTATGCAATCAGAAGACTTGATCAAACAGAATTTGGTAGAAAGGGGCGCCGAATTCGTGTTGAGTGGACCAAGGCAGAACGTGACAACAGAAGGTCTGGTGGCGACTCAAAGAAATCTTCAACCAATACAAAACCATCAAAGACTTTGTTTATCATAAATTTTGATCCTGTTCACACCAGAACAAGGGATTTAGAGAGACACTTTGATCCCTATGGGAAAATATCAAATTTAAGGATCAGAAGGAATTTTGCTTTTATCCAGTTTGAAACCCAGGAGGAAGCCACTAAAGCTTTGGAAGCAACTAACCTGAGCAAGTTTATGGACCGTGTTATCACAGTGGAGTATGCTATAAGGGATGATGATGTCAAAAGGGATGGATACAGTCCTGATAGAAGAGGTCGCGGCTCCCCTGATGGTAGGTATGGTCGTGGCTCTCCTGATGGGAGGTATGGCCGTGGAAGATCCCCAAGTCCTTATCGTAGAGGTAGGGGTAGCCCTGATTATGGCCGTGGATCAAATCCTGCTTCCAGACCAGAACCAAGAGGAAGCCCAAAGTATGAACGAGCTGAAAGCCCAATCAATGGGAGATACGACAGCCGATCACCCCCACCTCGTGGATCAAATCCATCTTCCAGACCAGAAGCAAGAGGAAGCCCCAAATATGAACGAGCTGAAAGCCCAATGAATAGGAGATATGATAGCCGATCTCCCCCACCTCGTGATAGGTCGCGATCTTGA 885 0.4542 MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSGFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIRVEWTKAERDNRRSGGDSKKSSTNTKPSKTLFIINFDPVHTRTRDLERHFDPYGKISNLRIRRNFAFIQFETQEEATKALEATNLSKFMDRVITVEYAIRDDDVKRDGYSPDRRGRGSPDGRYGRGSPDGRYGRGRSPSPYRRGRGSPDYGRGSNPASRPEPRGSPKYERAESPINGRYDSRSPPPRGSNPSSRPEARGSPKYERAESPMNRRYDSRSPPPRDRSRS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03651 294 MobiDBLite consensus disorder prediction 171 294 - -
Mepo1g03651 294 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 96 167 IPR000504 GO:0003723
Mepo1g03651 294 FunFam Serine/arginine-rich splicing factor RS31 1 85 - -
Mepo1g03651 294 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 97 289 - -
Mepo1g03651 294 SMART rrm1_1 97 163 IPR000504 GO:0003723
Mepo1g03651 294 SMART rrm1_1 3 70 IPR000504 GO:0003723
Mepo1g03651 294 MobiDBLite consensus disorder prediction 74 93 - -
Mepo1g03651 294 MobiDBLite consensus disorder prediction 265 294 - -
Mepo1g03651 294 FunFam Serine/arginine-rich splicing factor RS31 88 178 - -
Mepo1g03651 294 Gene3D - 1 86 IPR012677 -
Mepo1g03651 294 Gene3D - 87 175 IPR012677 -
Mepo1g03651 294 SUPERFAMILY RNA-binding domain, RBD 4 167 IPR035979 GO:0003676
Mepo1g03651 294 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 2 74 IPR000504 GO:0003723
Mepo1g03651 294 MobiDBLite consensus disorder prediction 171 187 - -
Mepo1g03651 294 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 98 160 IPR000504 GO:0003723
Mepo1g03651 294 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4 63 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03651 Mepo-Chr1 42418859 42422674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03651 4 170 Eukaryotic Initiation Factors Gene Family AT1G49760 23.497 2.73e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03651 K12893 - gmx:100797778 400.208