Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03649 ATGTCTGGAACTGAAGCTACAAAATATGCTTCTGCTACAAACAACATAACCAAATCAAAAAAACCAACCATGAGAAGATTCATTGGTGTGAGACAAAGGCCATCAGGTAGATGGGTAGCTGAGATCAAAGACTCATCTCAACATGTAAGATTATGGCTTGGAACCTATGACACACCAGAAGAAGCTGCTCGAGCTTACGACGAAGCTGCTCGAGCTTTACGCGGAGAAAATGCTCGAACCAACTTCGCCCTAGCAGTATCAACAGACAGTACAACACCATGCAGTGATGATCAAGGGCTAGTATCATCACCACAAACAAATGAAGCAAAAAACAGTTTAACTTTTGCTTCATTGAAAGCAAAATTGAGCAAGAATCTTCAAAGTATTATGGCAAGAACAAGTGATCATCATAACAACAAGTTTTCAAAGAGTAGAGTGAGTGATCATTTTACTTTTGCTAGCATATTCAACCGTAGGAATCATAATTACAATCAAATATCTGATTTGGATATGAAGAACATTGAGAAAGTTGTGCAGCCTAGCATCATTGTTCCCTCTAACGATGGTGATAATCATCATAACTACCCTTCTAGTGTTTCTGATTGTAGTTCTGAATGGTTTGGATTTCAGAATCTAGGGTTGGATTCTGATGGATCTGATATAGGAGAGATTAATAATAATGCTAATATTAATGTTGGTGATCAAGGTTTTTTGGAACAACTCATGGGGTGGATTGATGATGATAGTTCTGATATTTGTGAAGGTTCAAGTAGTAAGAGGTTTAAGGTATCTTCGTCTGTTCTTGTTCCTCCAACTTTCTCTAGTTCTCCTTATGATTGTGGTTCACCTTATAGTGGTTATGCTTCTCCATATAATAGTTGTGGATCCCCTTGTAATGGTTATGCCTCTCCTTATTATGGTAGCAAGAAGTAA 933 0.3783 MSGTEATKYASATNNITKSKKPTMRRFIGVRQRPSGRWVAEIKDSSQHVRLWLGTYDTPEEAARAYDEAARALRGENARTNFALAVSTDSTTPCSDDQGLVSSPQTNEAKNSLTFASLKAKLSKNLQSIMARTSDHHNNKFSKSRVSDHFTFASIFNRRNHNYNQISDLDMKNIEKVVQPSIIVPSNDGDNHHNYPSSVSDCSSEWFGFQNLGLDSDGSDIGEINNNANINVGDQGFLEQLMGWIDDDSSDICEGSSSKRFKVSSSVLVPPTFSSSPYDCGSPYSGYASPYNSCGSPCNGYASPYYGSKK 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03649 310 MobiDBLite consensus disorder prediction 1 21 - -
Mepo1g03649 310 FunFam ethylene-responsive transcription factor RAP2-11 25 84 - -
Mepo1g03649 310 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Mepo1g03649 310 PRINTS Ethylene responsive element binding protein signature 49 65 IPR001471 GO:0003700|GO:0006355
Mepo1g03649 310 MobiDBLite consensus disorder prediction 1 22 - -
Mepo1g03649 310 SUPERFAMILY DNA-binding domain 27 84 IPR016177 GO:0003677
Mepo1g03649 310 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Mepo1g03649 310 Pfam AP2 domain 26 75 IPR001471 GO:0003700|GO:0006355
Mepo1g03649 310 Gene3D AP2/ERF domain 25 85 IPR036955 GO:0003700|GO:0006355
Mepo1g03649 310 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 21 142 - -
Mepo1g03649 310 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
Mepo1g03649 310 CDD AP2 26 83 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03649 Mepo-Chr1 42399855 42400895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03649 26 83 AP2-EREBP Transcription Factor Family AT5G19790 74.138 4.81e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo1g03649 AP2 1.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03649 K09286 - mtr:25500954 550.821