Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03637 ATGATAACTATTCTATCGGTGCACGGTCTTATCACAAAGAATTGGATTCAACTTCAGCCTCCCTCTATATGTGAATTGATAAGAATTTATGGGGAAAACTATGGTGAGATCACTGCCAACAATTTGGATGGAGATTTGAAAAGGTTAAAGATTTATTGGAATGAGGTAGGACTAATATTGAAAGGGGATACCCCATCTTTCCATGTTAAAGTTCTTGGAACACTGGAAAAGGGTGCTGACAGGTGGCACATCTGCATGTGCTATTGGTTGCGACAAGGTCTTAATTGTGGTTATGGTTGTGTTGCGGCCGTTATGCTCAATGTGCTCCCTCCCTCACTCAACAAATTTTTACACTCAGATCAACTTCTCTGCATTTTACTCTCTTCTATCATGGAGTCTGACAAGTCCCAGTCAGCGAACCTGAGGAGGTACCATGGTCCAGTAGCCGGTGTAAAAGTGTTGGTTGTGGATGCTAATTCGGCATGCCGAACAATTGTATCAAAAATGCTTCTTTCACTTGGATATGAAGTTATGACGGCTTCACTAGCTTCCGATGCATTATCCATTATCTGTGAGAAGAAGAATGAGGTTAACCTTGTGCTTGTGGAGGTTCAGTTGCCAGACATGGAAATCTATGACCTCATAGGGAAAATGGGAGAAAGCTCTAATCTTCCGTCTTTCATTATGACTGCTTATGATGATGACACTCCTTCCATATCACGGGCTCTTGGTTTTGGAGCCAAATGGTGTTTTAGAAAGCCAGTTCAGATTTCTGATCTACATGACCTTTGGCGATTCGCAGTGTGGAACCGATATGAAACAATAGTCACTGAAGCAGTACCGGACTTCGTGTGTCATCTGTCAGATGTGATTATGGCAACCAAGGGTCTCGCATGCCAACCATCCATGAATACAGGAGAACGGTCTCGCCAAAATGCAATTGGTCTGGAAGGCCAACCATCCTTGAATGCAGGAGAAAAGACTCTCCGAAGTGCAAATGGCAAAGAACAGGAATTTCCTGATAAAGATAACTCAGTACTCCTGAACAGGAAAAGGAAAAGTTGGACTGATGATTTACACAGGAAGTTCTTGGAAGCTGTTGAAATAGCAGGAATCGGTGCTGGTTCGAAGACAATATTCCAGATTATGAATGTGGAAGGGTTTACCAAAGAGAGCGCCTCAAACTATTTACAGAGATATCGTCAATCTATGAACCTACGTGCTACTGCAATGGAACAGCATGTGAACGGATATGTGTCTCGGACTAACAAAAGTCAAGGAAAACGCCCTCTATGCTTCGAAGAACAAGTTGTGATCAACAATCCAGATGTCGATCCGAAGGATCTCAGTAATTTTGTGCCTGTGCATATTCTTGACACTTCTGCAACGTTTCTTTCCTTGGAAAGCTCAAGTTGTCAGGAGTTACCTTTCGGGCAATATGAGCTGTCCCTGCCATTGGAACAGAAAGGTGTTGCACACACCACATCCAGCCTTGGCAGGTTTATAAACCGTGTTAATGATGATGAATCTGAAAAGATCAGCCAGGTTTTTAATACAGAAGATGGAGAAGTTTCTATTGCAGGACAACAGTTGAATTTTTCAACACCGCTGACCTTTTACATGTGCGAACCATTATGCGCGGTGCATCCTACGCCGCCACTACCACCAGATGAAAAAGCATACTATGATCAGTTTTTTTATGCAAAAGGAACTCAGCTGTTTACTGATGAGGATTTGAAAATGTGGTTATCAACTATTCGAGGTATGAACATGCCAGTAATATATCATTGTGCGTGCGCTCGGACCGCGAGCACAAGCAATGTGAATTCTGTTGCTTGA 1839 0.4274 MITILSVHGLITKNWIQLQPPSICELIRIYGENYGEITANNLDGDLKRLKIYWNEVGLILKGDTPSFHVKVLGTLEKGADRWHICMCYWLRQGLNCGYGCVAAVMLNVLPPSLNKFLHSDQLLCILLSSIMESDKSQSANLRRYHGPVAGVKVLVVDANSACRTIVSKMLLSLGYEVMTASLASDALSIICEKKNEVNLVLVEVQLPDMEIYDLIGKMGESSNLPSFIMTAYDDDTPSISRALGFGAKWCFRKPVQISDLHDLWRFAVWNRYETIVTEAVPDFVCHLSDVIMATKGLACQPSMNTGERSRQNAIGLEGQPSLNAGEKTLRSANGKEQEFPDKDNSVLLNRKRKSWTDDLHRKFLEAVEIAGIGAGSKTIFQIMNVEGFTKESASNYLQRYRQSMNLRATAMEQHVNGYVSRTNKSQGKRPLCFEEQVVINNPDVDPKDLSNFVPVHILDTSATFLSLESSSCQELPFGQYELSLPLEQKGVAHTTSSLGRFINRVNDDESEKISQVFNTEDGEVSIAGQQLNFSTPLTFYMCEPLCAVHPTPPLPPDEKAYYDQFFYAKGTQLFTDEDLKMWLSTIRGMNMPVIYHCACARTASTSNVNSVA 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03637 612 PANTHER TWO-COMPONENT RESPONSE REGULATOR 152 434 IPR045279 GO:0009736
Mepo1g03637 612 Gene3D - 151 277 - -
Mepo1g03637 612 SMART REC_2 151 264 IPR001789 GO:0000160
Mepo1g03637 612 SUPERFAMILY Homeodomain-like 348 404 IPR009057 -
Mepo1g03637 612 ProSiteProfiles Response regulatory domain profile. 152 268 IPR001789 GO:0000160
Mepo1g03637 612 Pfam Response regulator receiver domain 153 262 IPR001789 GO:0000160
Mepo1g03637 612 Gene3D - 348 406 - -
Mepo1g03637 612 SUPERFAMILY CheY-like 150 268 IPR011006 -
Mepo1g03637 612 NCBIfam myb-like DNA-binding domain, SHAQKYF class 351 402 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03637 Mepo-Chr1 42262460 42266901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03637 150 401 Response Regulator Gene Family AT2G25180 27.626 8.36e-22 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo1g03637 Response_reg 1.8e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03637 - - mtr:25500959 861.677