Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03589 ATGTCTGCTATTAGGTTTTCCAATTTCAGTGTCCTAAATGTTCAAAATTATCACTCTAACCCTAATCGGTCATTGAAGATTTCAAGAATTTCATGTTTTTCTGTTGTGCCTGTGAAATCTATTGTATCAGTTGGTGGTGTAGGAGTCGGACTTGGACTTGCTACTGCTTTTGTTGCCAGAGACGTACTTGGCAATGTGCTCAGCGGTTTTTCCTTGCCATTCTCAATTGGAGATACAATACAAGTTGGATCGTTAGAGGGTCAAGTGGTGGATATTGGTCTTATTAGCACATCATTGCTTAGTCCTGAGAATTTCACAGTCACTGTGCTGAACTAA 336 0.3988 MSAIRFSNFSVLNVQNYHSNPNRSLKISRISCFSVVPVKSIVSVGGVGVGLGLATAFVARDVLGNVLSGFSLPFSIGDTIQVGSLEGQVVDIGLISTSLLSPENFTVTVLN 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03589 111 SUPERFAMILY Sm-like ribonucleoproteins 62 109 IPR010920 -
Mepo1g03589 111 Gene3D - 73 111 IPR023408 -
Mepo1g03589 111 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 36 109 - -
Mepo1g03589 111 Pfam Mechanosensitive ion channel 36 109 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03589 Mepo-Chr1 41776745 41781468 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03589 36 111 Mechanosensitive Ion Channel Family AT4G00290 62.500 7.15e-24 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03589 K22047 - aew:130780846 83.1889