Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03574 ATGGATCAAAATCAGAAACGAGAGGAAGAATGGTCGATCAACGACTTCGAGATCGGAAAGCCCCTCGGGAGAGGCAAATTCGGGAGAGTCTATGTTGCAAGAGAAGTCAAGAGTAAATATGTGATTGCATTGAAGGTCATCTTTAAGGAACAACTAGAAAAGTATAACATTCTTCATCAACTGAGGAGGGAAATGGAGATACAAATAGGCCTTAAACATCCAAACATATTGCGTCTCTATGGTTGGTTTTATGATGCCGAGCGTGTTTTCTTGATTCTTGAATATGCTCATAATGGTGAGCTATACAAGGAGCTTCGCAAAAAAGGTCATTTCTCTGAGAAACAAGCAGCAACGTACATTTTAAGCCTCACAAAGGCATTGGCATATTGTCACGAGAAGCATGTTATTCACAGAGATATCAAACCTGAAAATCTGTTGCTTGACCATGAGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCTGTACAATCTGTAAAAAAAAGAAAGACAATGTGTGGAACATTGGATTATTTAGCTCCTGAAATGGTAGAAAACAAAGGTCATGATTATGCAGTTGATAACTGGACTCTAGGTATTCTTTGTTATGAGTTCCTCTATGGTGCTCCTCCGTTTGAGGCTGAGAGTCAAGAAGATACCTTCAAAAGGATAAGAGATGTTGATCTGAACTTCCCTCCTACCCCTCATGTTTCTAAAAATGCCAAAAATCTGATAAGTCGGCTACTGGTAAAAGATTCTTCAAAAAGGCTCTCACTTCAGAAGATAATGGAGCATCCTTGGATAAAAGAGAATGCAAACCATATGGGTGTCTGCGAGTAG 837 0.3978 MDQNQKREEEWSINDFEIGKPLGRGKFGRVYVAREVKSKYVIALKVIFKEQLEKYNILHQLRREMEIQIGLKHPNILRLYGWFYDAERVFLILEYAHNGELYKELRKKGHFSEKQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSVKKRKTMCGTLDYLAPEMVENKGHDYAVDNWTLGILCYEFLYGAPPFEAESQEDTFKRIRDVDLNFPPTPHVSKNAKNLISRLLVKDSSKRLSLQKIMEHPWIKENANHMGVCE 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03574 278 Gene3D Transferase(Phosphotransferase) domain 1 100 275 - -
Mepo1g03574 278 CDD STKc_Aurora 15 268 - -
Mepo1g03574 278 FunFam Serine/threonine-protein kinase ark1 8 277 - -
Mepo1g03574 278 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Mepo1g03574 278 SMART serkin_6 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03574 278 Gene3D Phosphorylase Kinase; domain 1 3 99 - -
Mepo1g03574 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Mepo1g03574 278 FunFam Aurora kinase A 8 99 - -
Mepo1g03574 278 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 3 275 IPR030616 GO:0004672
Mepo1g03574 278 ProSiteProfiles Protein kinase domain profile. 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03574 278 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03574 278 SUPERFAMILY Protein kinase-like (PK-like) 7 270 IPR011009 -
Mepo1g03574 278 PIRSF ILK 2 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03574 Mepo-Chr1 41599214 41602629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03574 16 272 CBL-interacting serine-threonine protein kinases AT5G25110 38.403 5.52e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Mepo1g03574 Pkinase 9.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03574 K08850 - gmx:100775802 489.574