Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03566 ATGGATCAAGTAGCACAAGGTCGTCCTCTTCCACCTCCATTTCTCACTAGAGACCTTCATCTTCATCCTCATCATCAATTTCACACCAACCACCAAACCAACGAAGAGGAACAACAAAGTGGCAATGGTAGCTTAAGCCGAGGCCAAAAACGAGAACGAAACAACAACAACGACGACGGCAACAACACTCCTCCTGGAGGAGAAGGAAAAGACGACGGCGGCAGCGGAAGTGCTGGTGGAGGAAGTGGTGGTGAGATGGGAAGAAGACCAAGAGGAAGACCAGCAGGATCGAAAAACAAACCAAAGCCACCTATCATCATCACGAGGGACAGCGCGAATGCACTTCGATCCCACGTGATGGAAGTTGCAAATGGATGTGACATCATGGAAAGTGTGACGGTCTTTGCGCGAAGGAGGCAGCGTGGTGTCTGCATCCTTAGCGGAAGTGGGACCGTCACAAACGTGACTCTCCGTCAACCAGCATCGCCTGGTGCGGTAGTCACACTTCACGGAAGATTTGAGATATTATCCTTATCTGGCTCTTTCCTCCCGCCGCCTGCTCCACCAGCAGCGTCAGGATTAGCCATATATCTAGCTGGTGGACAAGGACAGGTCGTCGGTGGGAGCGTGGTGGGACCGTTGTTGGCTTCCGGTCCGGTTGTTATCATGGCAGCTTCCTTTGGAAATGCTGCTTATGAAAGGCTACCTTTAGAAGATGAAGAAACACCAGTGAATGTGCCAGGAAATGGAGGGTTAGGGTCACCAGGAACCATGGGAAGTCAACAACAGCAGCAGAACCAGCAACAGCAACAACTTGTAGCAGATCCTAATGCTTCATCACTTTTCCATGGAGTTCCTCAAAATCTTCTCAATTCATGCCAATTACCAGCTGAGGGTTATTGGGGTGGAAGTGCTCGTCCTCCTTTTTAA 930 0.5032 MDQVAQGRPLPPPFLTRDLHLHPHHQFHTNHQTNEEEQQSGNGSLSRGQKRERNNNNDDGNNTPPGGEGKDDGGSGSAGGGSGGEMGRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEVANGCDIMESVTVFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGNAAYERLPLEDEETPVNVPGNGGLGSPGTMGSQQQQQNQQQQQLVADPNASSLFHGVPQNLLNSCQLPAEGYWGGSARPPF 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03566 309 PIRSF ESCAROLA 16 309 IPR014476 GO:0003680
Mepo1g03566 309 MobiDBLite consensus disorder prediction 1 106 - -
Mepo1g03566 309 Pfam Plants and Prokaryotes Conserved (PCC) domain 116 228 IPR005175 -
Mepo1g03566 309 MobiDBLite consensus disorder prediction 254 280 - -
Mepo1g03566 309 MobiDBLite consensus disorder prediction 18 32 - -
Mepo1g03566 309 MobiDBLite consensus disorder prediction 238 280 - -
Mepo1g03566 309 FunFam AT-hook motif nuclear-localized protein 115 242 - -
Mepo1g03566 309 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 37 280 IPR014476 GO:0003680
Mepo1g03566 309 Gene3D - 115 246 - -
Mepo1g03566 309 SUPERFAMILY AF0104/ALDC/Ptd012-like 112 247 - -
Mepo1g03566 309 CDD DUF296 116 183 IPR005175 -
Mepo1g03566 309 ProSiteProfiles PPC domain profile profile. 112 250 IPR005175 -
Mepo1g03566 309 MobiDBLite consensus disorder prediction 33 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03566 Mepo-Chr1 41479288 41480879 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03566 1 309 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 63.063 4.23e-91 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03566 - - gmx:100816243 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03566 1 41479288 41480879 Mepo1g03566 1 41479288 41480879 ECH