Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03561 ATGGATTACTGTGGAGGAAAGATTGGTGGAAGTGATCAAAGAGGTGGCGGGCCTTGTGGTGCTTGCAAGTTTTTGAGGAGAAAGTGTGTAAAAGGTTGCATATTTGCACCATATTTTGATTCAGACCAAGGAACGGTTCATTTTGCAGCAGTTCATAAAGTGTTTGGTGCTAGTAATGCCTCTAAGTTACTCATGCGTATTCCAGCTCATAAACGTCTTGATGCTGTTGTTACTCTTTGCTATGAAGCTCTTGCTAGGGCTAGAGACCCTGTTTATGGTTGTGTTGCTCACATCTTTGCACTTCAACAACAGGTTATGAGCTTGCAGGCAGAGTTAACCTATGTTCAAGCCACTCTTGCGACAATGCAGCGCCTCCCAATCTCGCTAGCTCCATCTCTTCCGAACCCTCAAAGCTCTTCACCGAGTTTTCATTCCTCCTCCGATCACTTGGGAACAAATGCAGACATGCAGAGTACCTCTAACATGTCCATGCATTTTGATCCTCATCAGCCACTTTCATCATTGGACTTGAGCAGCTTCTTCAATCAATCAGATCAACAACTTGATGATGATGAACTCCAAGCTTTGGCTCGAGAATTTGTCTCTAGGTACTTGCCTGGAGTAAGATTTCAGCCATCTAATTCTCACTAA 651 0.4393 MDYCGGKIGGSDQRGGGPCGACKFLRRKCVKGCIFAPYFDSDQGTVHFAAVHKVFGASNASKLLMRIPAHKRLDAVVTLCYEALARARDPVYGCVAHIFALQQQVMSLQAELTYVQATLATMQRLPISLAPSLPNPQSSSPSFHSSSDHLGTNADMQSTSNMSMHFDPHQPLSSLDLSSFFNQSDQQLDDDELQALAREFVSRYLPGVRFQPSNSH 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03561 216 MobiDBLite consensus disorder prediction 130 168 - -
Mepo1g03561 216 Pfam Lateral organ boundaries (LOB) domain 18 116 IPR004883 -
Mepo1g03561 216 PANTHER LOB DOMAIN CONTAINING PROTEIN 16 164 - -
Mepo1g03561 216 ProSiteProfiles LOB domain profile. 17 119 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03561 Mepo-Chr1 41373353 41379475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03561 8 214 AS2 family AT4G00210 54.464 2.35e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo1g03561 LOB 1.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03561 - - tpra:123898243 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02026 3 29693355 29697062 Mepo1g03561 1 41373353 41379475 PCT