Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03552 ATGCAGTCACTACAATCCTTTGTTGTCATTTTAATATTTGTAGTACTTGCTTTTGATCTTTGTAAATCACAAGATTGTAGCAGTCCTTTCAAGACCATTACGGTTAGTAAATCAGGCGAAACAAATTTCCAAACAATTCAAAGTGCCATTGATTCTGTCCCTGGAGGAAATTCTCAGTGGATTCACATCCAAATTTCCCCTGGTGTTTATAGAGAGCAAGTCTTAATTCCCATGAGCAAAACATGCATTTATCTTGAAGGAGCTGGTAGCAGTTCAACGAGTATTGAATGGAGTACACATGAAGATGCTACTTTCGTATCAAAAGCAAATAATACTGTTGCAAAGGGCATTACTTTCACGAATACATTGAACAGCCCCTTATTATCAGAGGTCAATAACATCATACAAGCCAAAGCTTTTCGAATCTATGCAGACAAATGTGCTTTCTTTAGTTGTGCTTTTCTAGGGGTACAAGACACCCTATGTGATGACTATGGTCGCCATTACTACAATAATTGTTACATCCAAGGTGGAACCGATTTCATATATGGGGATGGTCAATCACTCTTTGAGGCAAGTACAATATTTTTTTCAATGGGGAAATATGGTCCCAAAAGAGATGGGGTTATTACAGCACATCAAAGGGATTCACCAAATGATCCAAGTGGGTTTGTGTTTAAAAATTGTAACATAAGTGGGACAGGAGGAAAGGTTCAACTTGGAAGGGCAATGGGTGCTTATGCAAGAGTCATCATAACTGATTCATATCTATCAGATGTTGTTAGTCCTGAGGGTTGGAATCCTAGAGCCTATGTTGGCCATGAAGAAAACCTTACTTTTGTGGAGGAGGGATGTAGAGGACCTGGAGCAAACAAATCAAAGCGTGTGAAATGGATGAAACACTTGAGTCAACCTGAACTTAATCAATTCTTGAATATCTCTTTTATTGATGAAGAAGGGTGGATGTCAAAATTGCCAACAACTGTATTCAGTTGA 996 0.3845 MQSLQSFVVILIFVVLAFDLCKSQDCSSPFKTITVSKSGETNFQTIQSAIDSVPGGNSQWIHIQISPGVYREQVLIPMSKTCIYLEGAGSSSTSIEWSTHEDATFVSKANNTVAKGITFTNTLNSPLLSEVNNIIQAKAFRIYADKCAFFSCAFLGVQDTLCDDYGRHYYNNCYIQGGTDFIYGDGQSLFEASTIFFSMGKYGPKRDGVITAHQRDSPNDPSGFVFKNCNISGTGGKVQLGRAMGAYARVIITDSYLSDVVSPEGWNPRAYVGHEENLTFVEEGCRGPGANKSKRVKWMKHLSQPELNQFLNISFIDEEGWMSKLPTTVFS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03552 331 SUPERFAMILY Pectin lyase-like 31 327 IPR011050 -
Mepo1g03552 331 Gene3D - 30 330 IPR012334 -
Mepo1g03552 331 Pfam Pectinesterase 33 317 IPR000070 GO:0030599|GO:0042545
Mepo1g03552 331 FunFam Pectinesterase 28 326 - -
Mepo1g03552 331 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03552 Mepo-Chr1 41273886 41277237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03552 28 323 Carbohydrate Esterase AT5G47500 36.977 5.46e-68 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03552 - - mtr:25501033 622.083