Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03550 ATGGACAAGGGACCACCTCCTACCCTCTTTGTTAATGATGGTTCGTTTATGGAGAGGTTCAGGCAGCTCCAACAAGAGCAGGAGAGGGGGAAAAATGCCAAACCAGAGGACTCTAAACCAATTAAAGTTGTTTCAGGACCTCTGACTCCTAAACCCTCCATTAGTAAGGCTAATGATGCAAAGAAATCCTCCCAGGGTGGTTCCAGTGGCAAACTTGCTTTCAGCCTGAAACAAAAGTCAAAGCTAGTGCCGCCCCCTGTTAAGTTGGCTGATGACGATGAAGATGAAATAGATGCTGGGTATGTTTCGAATGATGCACCGACAAAACGGCAAAAATTGGGTCAGGATGACGGCATTGAGCAATCATCAAGACAACTTGATGTTGCACCTCCTCCCCCAAGTGATCCTACAGTGAAGAAAGTTGCTGACAAACTTGCAAGTTTTGTGGCTAAAAATGGAAGGCCATTTGAGGATGTTACACGGCTAAAAAACCCTGGAGACTCACCTTTCAAGTTTTTATTTGATGTTAAATGTTCTGACTATAAATATTATGAACATCGGCTTGCTCAAGAGGAGAAGGCCCTTTCACAGTCCAACGAACCACAGGCTTATCAAAATGCAGGGACAAGCATTCCATCTTCCAGACCAACAAATGGTCCTCAGAGATCGTCCCAGCAGCAGTCAGCTTACCAAATCCCTGCCTCTGCTTTATATGATAGTGTTGACGTACCAAGGGGTTCTGGATCTGCAGGACAAGCATTTTCAGTTGGAAGCTCGGATGAGCCCGGTGGATCATCAAAGGCCAATTCTTTAGCACTAATGGAGTTTTACATGAAGAAAGCCGCACAGGAAGAAAAGTTCAAACAACCTAGGCATTCAAAAGATGAGATGCCCCCTCCTCCATCTCTTCAAGGTTCAACTTTTGATGCTTCAGCTTCAGGGAAAAAAGGCCATCACATGGGTGATTATATTCCTCAGGAAGAATTGGAGAAGTTCTTGGCTAGCTGTAATGACGCCGCAGCTATGAAAGCTGCAAAGGAGGCTGCTGAGAGGGCCAAAATTCAGGCTGATAATGTGGGCCACAAGCTTTTATCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTAGGTGGCTCTAGGAAGGGTATTGCAGATCCTATAATGGCAGGCAGTGTTAAGAAAGATAACTTGGGAGTAGGTGCTGTCCAACCTGGGGAGGTGACTCCTGAGGATGACATCTATGAGCAGTACAAAAAGCGGATGATGCTTGGCTACCGTCACAGGCCGAATCCTCTGAACAATCCCCGCAAGGCTTACTACTGA 1320 0.4598 MDKGPPPTLFVNDGSFMERFRQLQQEQERGKNAKPEDSKPIKVVSGPLTPKPSISKANDAKKSSQGGSSGKLAFSLKQKSKLVPPPVKLADDDEDEIDAGYVSNDAPTKRQKLGQDDGIEQSSRQLDVAPPPPSDPTVKKVADKLASFVAKNGRPFEDVTRLKNPGDSPFKFLFDVKCSDYKYYEHRLAQEEKALSQSNEPQAYQNAGTSIPSSRPTNGPQRSSQQQSAYQIPASALYDSVDVPRGSGSAGQAFSVGSSDEPGGSSKANSLALMEFYMKKAAQEEKFKQPRHSKDEMPPPPSLQGSTFDASASGKKGHHMGDYIPQEELEKFLASCNDAAAMKAAKEAAERAKIQADNVGHKLLSKMGWKEGEGLGGSRKGIADPIMAGSVKKDNLGVGAVQPGEVTPEDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03550 439 SMART G-patch_5 354 401 IPR000467 GO:0003676
Mepo1g03550 439 Pfam Surp module 140 190 IPR000061 GO:0003723|GO:0006396
Mepo1g03550 439 SUPERFAMILY Surp module (SWAP domain) 123 196 IPR035967 GO:0003723|GO:0006396
Mepo1g03550 439 MobiDBLite consensus disorder prediction 251 266 - -
Mepo1g03550 439 MobiDBLite consensus disorder prediction 192 267 - -
Mepo1g03550 439 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 61 439 IPR040169 -
Mepo1g03550 439 SMART surpneu2 139 193 IPR000061 GO:0003723|GO:0006396
Mepo1g03550 439 MobiDBLite consensus disorder prediction 284 318 - -
Mepo1g03550 439 ProSiteProfiles G-patch domain profile. 356 403 IPR000467 GO:0003676
Mepo1g03550 439 ProSiteProfiles SURP motif repeat profile. 141 184 IPR000061 GO:0003723|GO:0006396
Mepo1g03550 439 MobiDBLite consensus disorder prediction 24 139 - -
Mepo1g03550 439 MobiDBLite consensus disorder prediction 194 234 - -
Mepo1g03550 439 Gene3D Surp module 113 198 IPR035967 GO:0003723|GO:0006396
Mepo1g03550 439 MobiDBLite consensus disorder prediction 24 38 - -
Mepo1g03550 439 MobiDBLite consensus disorder prediction 56 75 - -
Mepo1g03550 439 Pfam G-patch domain 357 400 IPR000467 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03550 342 439 C2H2 Transcription Factor Family AT5G26610 31.858 5.13e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03550 K13096 - gmx:100786213 649.432