Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03522 ATGGCGGAGCACGGTACCACCACCATCAACCACCACGAATACCACCAAAACAACAACATCAACGACGAGAACAAGAAGAAAGATAAGACTTCAGATCCAGACTTATTCTGCTGTCTTCTTCAACCTCTCACCTCCGACGCTGATCCTGAGTACACCGGCATTCGTCGCCTCCTTCTTCATCAAAAAGCCGAAGCTGGAATTCTCCGCCGTAAGGATTGGAGATGCAATGGGAAAACTTACGTGGCATACCGGAATTATATAAACAGGCCGAGGAACTGGGAAAGTTTAGGACAGGCCCCAAGTCTTCGAAGTACTCCGGGAAACAGTGGCCGATGGTTTCCATCTCCAAGTCCACTCTCCCGTTGGTCTGAGGTGGACAGCTGGAGTTCTGGGAAGGATGTCCAAGTTGCAAATTCAGTATCCAATCATAGAGCAAGTTTTGGCTCTGGGTCAAATGCAAGTGATTCTGATCGTCCACGAATTCGTGGTGTTGAGCCTGCCTATTCCTTCGTAGGAATGCATTGCATCTTCGACCAGTGCAAAGCCTCTGTTACGGTGATAAAGTTTGGGCACATGAGTTCTGACCTACTTGCCTATGGGGCATCAGATGGAACCCTGACTGTGTGCAGTGTTTCAGAGAAACCTTCAGTCATCAAACAATTAAACGGCCATTCGAAAGACATTACAGATTTCGATTTTACATCAAACAATCAGTACATTGCTTCTGCTTCGTTGGATAAAACTGTAAGAGTATGGGAGATAGAAAAAGGAAATTGCATGCGGGTGATATATGGAGTTTCTTCACAGTTGTGTATCCGTTTCCACCCTGTAAATAACAACTTCCTTTCAGTTGGCAATGCAAACAAAGAAATCAATGTGTTCAATTTTAGCACTGGGAGGACAATTAACAAGTCGGTATTTGACGCCGAAGTTACCTCCATGGACCACGATCATACTGGCCATCTCATATTTTGTGGAGATGCGCAGGGATGTATATACTCTGTAAATATGAACTCCCACACAGGTATATTATCCCGCTCACATCGTCATCGAAGTAGCAGCAAACACAGATCTCCAGTCACAACAATGCAGTATAGGAGTTTCTCTCTGCTAGCTCGAGGACCTGTGTTGTTGACCTGTACTCAGGATGGAAATCTATCTTTTTTCAGTGTGGCTTTGGAGATAAAAGGTTATTTAACTCTTCGTTGCTCGCTCAAGTTAACTCCTCGGATACACAAAATTCAAGCTTCTTTCTGCCCTCTTCTTTCTCTTGAAAAAGGAGAATTCATTGTTGCTGGAAGTGAGGACTCAAACGTCTATTTTTATGATTTAACAAAGCCAAAGCATACATGTGTGAACAAGCTACAGGGTCATCGGTTTCCTGTGATGGGGATTGCTTGGAACCATGGAGAAAACTTTTTGGCTTCATCTGATTTTTACGGCATAGTAATTGTTTGGAAGAGAGAAAGAACAAATCAGAACAAGAATACATAG 1494 0.4371 MAEHGTTTINHHEYHQNNNINDENKKKDKTSDPDLFCCLLQPLTSDADPEYTGIRRLLLHQKAEAGILRRKDWRCNGKTYVAYRNYINRPRNWESLGQAPSLRSTPGNSGRWFPSPSPLSRWSEVDSWSSGKDVQVANSVSNHRASFGSGSNASDSDRPRIRGVEPAYSFVGMHCIFDQCKASVTVIKFGHMSSDLLAYGASDGTLTVCSVSEKPSVIKQLNGHSKDITDFDFTSNNQYIASASLDKTVRVWEIEKGNCMRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFSTGRTINKSVFDAEVTSMDHDHTGHLIFCGDAQGCIYSVNMNSHTGILSRSHRHRSSSKHRSPVTTMQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIKGYLTLRCSLKLTPRIHKIQASFCPLLSLEKGEFIVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMGIAWNHGENFLASSDFYGIVIVWKRERTNQNKNT 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03522 497 Pfam WD domain, G-beta repeat 451 487 IPR001680 GO:0005515
Mepo1g03522 497 Pfam WD domain, G-beta repeat 218 252 IPR001680 GO:0005515
Mepo1g03522 497 ProSiteProfiles Trp-Asp (WD) repeats profile. 455 496 IPR001680 GO:0005515
Mepo1g03522 497 MobiDBLite consensus disorder prediction 1 27 - -
Mepo1g03522 497 Gene3D - 169 268 IPR015943 GO:0005515
Mepo1g03522 497 MobiDBLite consensus disorder prediction 141 160 - -
Mepo1g03522 497 Gene3D - 269 413 IPR015943 GO:0005515
Mepo1g03522 497 PANTHER WD REPEAT PROTEIN 26-RELATED 170 492 - -
Mepo1g03522 497 ProSitePatterns Trp-Asp (WD) repeats signature. 240 254 IPR019775 -
Mepo1g03522 497 ProSiteProfiles Trp-Asp (WD) repeats profile. 221 262 IPR001680 GO:0005515
Mepo1g03522 497 SUPERFAMILY WD40 repeat-like 176 488 IPR036322 GO:0005515
Mepo1g03522 497 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 221 258 - -
Mepo1g03522 497 Gene3D - 414 496 IPR015943 GO:0005515
Mepo1g03522 497 SMART WD40_4 407 443 IPR001680 GO:0005515
Mepo1g03522 497 SMART WD40_4 170 210 IPR001680 GO:0005515
Mepo1g03522 497 SMART WD40_4 214 253 IPR001680 GO:0005515
Mepo1g03522 497 SMART WD40_4 298 336 IPR001680 GO:0005515
Mepo1g03522 497 SMART WD40_4 346 390 IPR001680 GO:0005515
Mepo1g03522 497 SMART WD40_4 256 295 IPR001680 GO:0005515
Mepo1g03522 497 SMART WD40_4 448 487 IPR001680 GO:0005515
Mepo1g03522 497 MobiDBLite consensus disorder prediction 141 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03522 Mepo-Chr1 40823191 40831139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03522 193 332 Miscellaneous Gene Families AT5G08390 23.944 5.26e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03522 K24739 - gmx:100792346 845.499