Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03497 ATGAATACATGTTCCTTGCTGATCCTCTTTTACTTCTTCCTTTGTTTCATAATTTTTCTTTCTCATGCTCTAAACAATGGTTTTAGTGTTGAACTCATCCACCGCGACTCCTCAAAATCACCACTATACCAACCTACACAAAACAAATACCAACATATTGTCAATGCCGCACGCCGTTCTATCAACCGCGCCAATCATTTCTACAAAACTGCCCTCACAAACACACCTCAATCAACTGTAATCCCCGATCATGGTGAGTATCTCATGACCTATTCAGTTGGTACCCCACCATTTAAGTTATATGGCATTGCTGATACAGGTAGTGACATTGTTTGGCTTCAATGCAAGCCTTGCAAAGAATGTTACAATCAAACCACTCCTAAGTTTAAACCATCAAAATCGTCAACTTACAAAAACATTCCATGTTCGTCTGACCTATGTAAATCTGTGCAACAAGGTGCCGTTTGTAATGATCAAAAATTTTGTGAATATAGTATTTCTTATGGTGATAGTTCACAATCGAACGGAAATCTTAGTGTTGATACTCTTACATTAGAGTCCTCCACTGGACGTCCTATTTCATTTCCTAAAACTGTGATAGGATGTGGAACTGACAATACAGTGTCATTTCATGGTGCAAGCTCTGGTATAGTTGGCCTTGGAGGCGGACCAGCGTCTCTTATTACACAATTGGGATCATCAATTGATGCAAAATTCTCTTATTGTTTGTTGCCAAACCCGGTTGAGTCAAACACGACAAGCAAACTCAATTTTGGAGATGCCGCTGTGGTTTCCGGGGATGGTGTTGTGTCAACCCCTATAGTGAAAAAGGATCCTATAGTTTTCTACTATTTGACATTGGAAGCATTTAGTGTTGGTAACAAAAGAATAGAATTTGAAGGGTCTTCAAATGGTGGTCATGAGGGTAACATCATAATTGATTCAGGTACAACGTTGACAGTTATTCCAACTTATGTTTATAATAATTTGGAATCAGGTGTGTTGGAATTGGTGAAACTAAAGCGTGTTGATGATCCAACCCGAGTATTTAACCTTTGCTATAGTGTCACATCAGATGGATATGATTTTCCTCTAATAACGGCACATTTTAAAGGTGCAGATGTTAAGTTGCATCTTATTAGTACATTTGTTGCTGTTGCAGATGGCATTGTTTGCCTTGCTTTTGCAACTACTACTGGGTTCCCTCCTTCTAACGTCGTTTCCATTTTTGGAAACTTAGCTCAGCAGAATTTGTTGGTTGGTTATGACCTTCAACAAAAAATTGTGTCGTTTAAGCCTACTGATTGTAGCAAAGTGTAA 1320 0.3871 MNTCSLLILFYFFLCFIIFLSHALNNGFSVELIHRDSSKSPLYQPTQNKYQHIVNAARRSINRANHFYKTALTNTPQSTVIPDHGEYLMTYSVGTPPFKLYGIADTGSDIVWLQCKPCKECYNQTTPKFKPSKSSTYKNIPCSSDLCKSVQQGAVCNDQKFCEYSISYGDSSQSNGNLSVDTLTLESSTGRPISFPKTVIGCGTDNTVSFHGASSGIVGLGGGPASLITQLGSSIDAKFSYCLLPNPVESNTTSKLNFGDAAVVSGDGVVSTPIVKKDPIVFYYLTLEAFSVGNKRIEFEGSSNGGHEGNIIIDSGTTLTVIPTYVYNNLESGVLELVKLKRVDDPTRVFNLCYSVTSDGYDFPLITAHFKGADVKLHLISTFVAVADGIVCLAFATTTGFPPSNVVSIFGNLAQQNLLVGYDLQQKIVSFKPTDCSKV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03497 439 ProSiteProfiles Peptidase family A1 domain profile. 87 432 IPR033121 -
Mepo1g03497 439 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 311 322 IPR001969 GO:0004190|GO:0006508
Mepo1g03497 439 CDD pepsin_A_like_plant 86 436 IPR034161 -
Mepo1g03497 439 Gene3D Acid Proteases 66 260 IPR021109 -
Mepo1g03497 439 FunFam Aspartic proteinase CDR1 261 439 - -
Mepo1g03497 439 PANTHER OS07G0603500 PROTEIN-RELATED 30 437 - -
Mepo1g03497 439 Pfam Xylanase inhibitor N-terminal 87 260 IPR032861 -
Mepo1g03497 439 FunFam Probable aspartic protease At2g35615 67 259 - -
Mepo1g03497 439 SUPERFAMILY Acid proteases 80 437 IPR021109 -
Mepo1g03497 439 Pfam Xylanase inhibitor C-terminal 283 432 IPR032799 -
Mepo1g03497 439 Gene3D Acid Proteases 264 439 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03497 Mepo-Chr1 40560647 40561966 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03497 68 439 Miscellaneous Gene Families AT1G44130 27.681 4.68e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03497 - - mtr:11411196 619.387