Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03476 ATGGGCATGGCTGCAGAGAATCAGTTTCATGTTTTGGCTGTTGATGATAGTATTATTGATAGAATGTTGATTGAGAGGCTCCTCAAAACTTCTTCTTTTAATGTTACTACAGTGGATTCTGCTAGTAAGGCCTTGAAATTTCTTGGTTTGCTTGAGGATGAAACGAGGACTTATGACACTCCTATTGCTTCAGAAATTAATCAGGATGTAGATGTAAATCTGATTATAACAGATTACTGTATGCCAGGGATGACCGGCTATGATCTGTTGAGAAAAATCAAGGAATCCAAATCTTTCAAAGACATACCTGTTGTGATAATGTCCTCAGAGAATGTTCCATCTAGGATAAACAGATGTTTGGAAGAAGGGGCTGAAGAATTTTTCCTGAAACCAGTTCAACTATCAGATGTAAGCAAGCTGAAGCCACATTTGTTGAAATCAAAAGTTAAGGAAGAGAAAGAACAACCTATCAACATCAAAAGGAAGGGTATGGAAGAAAGTCAATCACCAGATAAAACTAGGCCAAAAGTTGGCATTTAA 540 0.3722 MGMAAENQFHVLAVDDSIIDRMLIERLLKTSSFNVTTVDSASKALKFLGLLEDETRTYDTPIASEINQDVDVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVSKLKPHLLKSKVKEEKEQPINIKRKGMEESQSPDKTRPKVGI 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03476 179 SMART REC_2 9 144 IPR001789 GO:0000160
Mepo1g03476 179 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 162 IPR045279 GO:0009736
Mepo1g03476 179 CDD REC_typeA_ARR 11 140 - -
Mepo1g03476 179 SUPERFAMILY CheY-like 8 145 IPR011006 -
Mepo1g03476 179 ProSiteProfiles Response regulatory domain profile. 10 145 IPR001789 GO:0000160
Mepo1g03476 179 Pfam Response regulator receiver domain 11 137 IPR001789 GO:0000160
Mepo1g03476 179 Gene3D - 10 174 - -
Mepo1g03476 179 MobiDBLite consensus disorder prediction 150 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03476 Mepo-Chr1 40364521 40365945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03476 1 176 Response Regulator Gene Family AT2G41310 53.456 1.77e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo1g03476 Response_reg 2.5e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03476 K14492 - gmx:100787436 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03476 1 40364521 40365945 Mepo5g02997 5 36745338 36749496 PCT