Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03460 ATGGAAGGGAAGGGTATTTCAGGTGATAGTGTTATCTACACTAGTCTCGCTTTTTCTTATTGGAAATCAGGGAACACAAATAGTGCCTCAGATATGTTAGAAGAGATGGCTAGGAGAAGGTTGGTGATCACTGTAAAAATCTATAGATACTTTAGTGCTCTTGATGTTTCTCTTTGCTCTCTCCTCTCATTTCGTGCCATGGCGGTTGAGTTTGTTGGTGGTTCTCTTCTTTCTGCTTTCATTCAGCTACTGTCCATCAATACTGTGGTCGACGATGCAGAAAAAAATCAGATCAGAAATCGACACTTGAAAACATGGCTTGATGCGGTCATAGATGTTATTTTTGAAGCAGAGGATCTGTTGGAAGAAATTGACATTGAAGTTTCCAGATGCAAACGGGAAGTTGAATCTCAATCCAGTATTCCTACTAGCAAGGTATGGAGTTTCTTTAATGTCTCTTCTAGCTCATTTAACAAAGAAATTGAATCAAAGATGTATGAAGTCCTTGACAACCTAGAACATCTTGCTAGCAAAAAGGACATACTAGATTTGAGAAAGGCTACTAAGACTCAAAAGAAAAATGCTACTAGTGATTATGGATCGAATAGCCAAGTGTCACAAAAATTGCAATCCACATCTATGCCTGTTGATTCTGTTATATATGGAAGAGATGATGACAAGGAGATTATCCTTGACTGGCTAACATCTAATGCTGAGAATGATAACCAACTCCTATCAATAATTTCTATAGTTGGTATGGGTGGGATGTGCAAGACCACGCTTACCCAACATTTATACAATGGCCCAAAAGTGGAGGGTAAATTTGATGTCAAGGCTTGGATTTGTGTTTCACAAGATTTTGATGTTTTCAAGGTAACAAGATCTATTCTTGAGGGTATTACCGGATCAACTGATGATAGTAGAGACATAAAAATGGTTCAAGGCAGGTGGAAGGAAAAACTTACTGGGAAGCGATTTCTTCTTGTTTTGGATGACATTTGGAACGAAAACCATATGCAATGGGAAGCTTTGCAGACTCCTTTTAATTATGGGAACCCAGGAAGCAAAATTCTTGTCACTACACGCAATCTAAAAGTTTCTTCAATCATCCGAGCAAATGAAATGTTTCGACTAGAGCATTTAGAAGAAAAACATTGTTGGGAATTATTTTCCTTACATGCTTTCCAAGATGAAAATCCTCAAATAAATCCCGACTCAAAGGAGAGTATGAGTGTAGAAGAAGTTGGGGAACAATACTTCAATGACCTATTTTCAAGATCTGAGGAAGGTGCAAGTAAGCTCTGGGTGTCTAGCACATTGATGCATGATTTGTTCTCAAAGTTTAAGTTTTTTCGTGTATTGTCATTGTCTGGTTTTGCCATTGAGAATGAGTTGCTTGATAGCATAGGCAACCTCAAGCATCTTAGTTATCTAGACCTTTCTGGTACCAACATAAAAAAGCTGCCTAATTCAGTATGTTCTCTCTATAACTTGCAAATACTGAAATTGAGGAATTGTTTGTCTTTGGAAGAGTTGCCATTGCATTTATGTAATCTCACTAATTTGCGTTACCTTGATTTTAGTGGAACGAAAGTGAGAAAAATGCCTATGAATGTGCGAAAACTAAAAAATCTTCAAGTACTTAGTTCATTTTATGTGGACAAAGGTAGCAATGCCAATGTTCATAACTTGGGAGAACTCAATCTTCATGGAACACTACAAATTTCAGAGATGCAAAACATTGTAAATCCATCTGATGCACTGGCAGCAAATTTGAAAAATAAGGTACACCTTGTGAAGCTAGAGTTAGAATGGAATGGAAACAGTGATAACTCGGAGAAAGAAGGGAAGTGTTGGAGAAGCTACAACCTTCCAAACACTTGA 1884 0.3758 MEGKGISGDSVIYTSLAFSYWKSGNTNSASDMLEEMARRRLVITVKIYRYFSALDVSLCSLLSFRAMAVEFVGGSLLSAFIQLLSINTVVDDAEKNQIRNRHLKTWLDAVIDVIFEAEDLLEEIDIEVSRCKREVESQSSIPTSKVWSFFNVSSSSFNKEIESKMYEVLDNLEHLASKKDILDLRKATKTQKKNATSDYGSNSQVSQKLQSTSMPVDSVIYGRDDDKEIILDWLTSNAENDNQLLSIISIVGMGGMCKTTLTQHLYNGPKVEGKFDVKAWICVSQDFDVFKVTRSILEGITGSTDDSRDIKMVQGRWKEKLTGKRFLLVLDDIWNENHMQWEALQTPFNYGNPGSKILVTTRNLKVSSIIRANEMFRLEHLEEKHCWELFSLHAFQDENPQINPDSKESMSVEEVGEQYFNDLFSRSEEGASKLWVSSTLMHDLFSKFKFFRVLSLSGFAIENELLDSIGNLKHLSYLDLSGTNIKKLPNSVCSLYNLQILKLRNCLSLEELPLHLCNLTNLRYLDFSGTKVRKMPMNVRKLKNLQVLSSFYVDKGSNANVHNLGELNLHGTLQISEMQNIVNPSDALAANLKNKVHLVKLELEWNGNSDNSEKEGKCWRSYNLPNT 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03460 627 Gene3D - 57 164 - -
Mepo1g03460 627 Gene3D - 200 376 IPR027417 -
Mepo1g03460 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 402 IPR027417 -
Mepo1g03460 627 Pfam Rx N-terminal domain 81 138 IPR041118 -
Mepo1g03460 627 SUPERFAMILY L domain-like 439 611 - -
Mepo1g03460 627 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 9 43 IPR002885 -
Mepo1g03460 627 ProSiteProfiles Leucine-rich repeat profile. 474 495 IPR001611 GO:0005515
Mepo1g03460 627 PANTHER DISEASE RESISTANCE PROTEIN RP 425 611 IPR044974 GO:0006952
Mepo1g03460 627 PRINTS Disease resistance protein signature 320 334 - -
Mepo1g03460 627 PRINTS Disease resistance protein signature 493 509 - -
Mepo1g03460 627 PRINTS Disease resistance protein signature 247 262 - -
Mepo1g03460 627 Gene3D Ribonuclease Inhibitor 432 624 IPR032675 -
Mepo1g03460 627 FunFam Probable disease resistance protein At1g61300 202 375 - -
Mepo1g03460 627 Pfam NB-ARC domain 224 401 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03460 Mepo-Chr1 40118670 40122599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03460 245 403 WRKY Transcription Factor Family AT5G45050 26.786 3.93e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03460 - - lja:Lj0g3v0227339.1 384.8