Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03458 ATGGCGGGTGCATTGGTTGGTGGTGCTCTTCTTTCTGCTTTCCTTCAGGTCACATTCGAAAAGCTTGCTTCTGCTGGAATTGAAGACTACTTTCGAGGAAGAAAACACAACGAGAAGCTTCTGAAGAGGCTCAACATCACACTTCTCTCCATCAATGCTGTGGTTGATGATGCAGAACTAAAGCAGATCAGAAATCCAAACGTGAGAGCATGGCTTGATGCTGTCAAAGATGCTGTGTTAGATGCAGAGGATCTCTTGGAAGAAATTGACTTTGAAGTTTCCAAATCCAAGCTGGAAGCTGAATCTCAATCTACCACTAACAAGGTATGGAACTTCTTCAATGCTTCTTCCAGTTCATTTGACAAAGAAATTGAATCAAAGATGCAAGAAGTCCTTGACAACCTAGAATATCTTGCTAGCAAAAAAGACATACTAGATTTGAAAGCAACTTCTAGTGGTTTTGGTGTTGGATCAAGTAGCCAAGTGCCAAAGAAATTGCCATCAACATCTTTGCCTATTGATAATGTTATCTATGGCAGAGAAGTTGACAAGGAGATTATCTCTGATTGGCTCACATCAGATGCTGAGAATAATAATGAACAACTATCAATAATTTCTTTAGTTGGTATGGGTGGGATGGGCAAGACCACGCTTGCCCAACACTTATACAATGACCCAAAGATGGACGGTAAATTTGATGTCAAAGCTTGGGTCTGCGTTTCACAAGAATTTGATGTTTTCAAAGTAACAAGAGCTATTCTTGAGGGTATCACTGGATCTACTAATGACAGTAGAGACCTAGATATGCTTCAGGTGAGGTTGAAGGAAAAACTGAATGGGAAGAAATTTCTTCTTGTTTTGGACGACGTTTGGAATGAAAAACGTGACCAATGGGAAGCTTTGAATACGCCTCTTAATTACGGGGCTAAGGGAAGCAAAATTCTAGTCACCACCCGCAGTAAGAAAGTGTCTTCAATCATGCGATCAAATAAAATTCTTCAGCAATTAGAAGATGAACATTGCTGGAAGTTGTTTGCTAAGCATGCATTCCAAGATGAAAATCCTCAGATAAATCATGACTTTATGGACATCGCTAAGAGGATACTTACAAAATGCCAAGGATTGCCTCTAGCCTTAAAAACAATTGGAAGTCTATTGTCCAAAAAATCATCTTTGGTGGAATGGGAAAGCATATTGGCAAGCGAGATATGGGACTTACCAGAAGAGGAGAGCAACATCATCCCCGCTTTAATGTTGAGCTATCACCGCCTTCCATCTCATCTCAAGAGATGTTTTTCTTACTGTGCCTTATTCCCAAAAAATTATGTGTTTGTAAAGGAAGATTAA 1347 0.3979 MAGALVGGALLSAFLQVTFEKLASAGIEDYFRGRKHNEKLLKRLNITLLSINAVVDDAELKQIRNPNVRAWLDAVKDAVLDAEDLLEEIDFEVSKSKLEAESQSTTNKVWNFFNASSSSFDKEIESKMQEVLDNLEYLASKKDILDLKATSSGFGVGSSSQVPKKLPSTSLPIDNVIYGREVDKEIISDWLTSDAENNNEQLSIISLVGMGGMGKTTLAQHLYNDPKMDGKFDVKAWVCVSQEFDVFKVTRAILEGITGSTNDSRDLDMLQVRLKEKLNGKKFLLVLDDVWNEKRDQWEALNTPLNYGAKGSKILVTTRSKKVSSIMRSNKILQQLEDEHCWKLFAKHAFQDENPQINHDFMDIAKRILTKCQGLPLALKTIGSLLSKKSSLVEWESILASEIWDLPEEESNIIPALMLSYHRLPSHLKRCFSYCALFPKNYVFVKED 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03458 448 Gene3D - 336 425 IPR042197 -
Mepo1g03458 448 Pfam NB-ARC domain 185 400 IPR002182 GO:0043531
Mepo1g03458 448 Gene3D - 15 129 - -
Mepo1g03458 448 FunFam Probable disease resistance protein At1g61300 160 332 - -
Mepo1g03458 448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 435 IPR027417 -
Mepo1g03458 448 PANTHER DISEASE RESISTANCE PROTEIN RP 44 447 IPR044974 GO:0006952
Mepo1g03458 448 PRINTS Disease resistance protein signature 204 219 - -
Mepo1g03458 448 PRINTS Disease resistance protein signature 277 291 - -
Mepo1g03458 448 PRINTS Disease resistance protein signature 372 386 - -
Mepo1g03458 448 Gene3D - 158 335 IPR027417 -
Mepo1g03458 448 Pfam Rx N-terminal domain 11 104 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03458 Mepo-Chr1 40105255 40106601 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03458 202 396 WRKY Transcription Factor Family AT5G45050 27.228 3.45e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03458 - - gmx:100781012 569.311