Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03436 ATGGAGGTGCAGGATGATAATAAGAATAGCAGAATCAATCCAACAAGTGGGTTTTGTAGCTCTAATTCAATCTTCTACAGCAAGAGGAAACCCCTCCTACTTCCTCCAAACCACTCCTTAGATGCCACCACTTTTATCTCCTCCCGCGCCCATCACGGCCACACTGCCTTCATCGACGCCTCCACCGGCCACCACTTTACCTACAAACAACTTTGGAAAGCCGTCGATGCTGTCATCTCCTCTCTCTCCAACATGGGAATCAAAAAGGGCGATGTTATTCTCCTCCTCTCTCCTAACTCCATTTACTTCCCTATGGTGTGTCTCAGTGTCATTTCCCTTGGCGCCATCATCACCACCACCAATCCCCTCAACACAGCACATGAAATCGCAAAACAGATCGCGGATTCCAAACCTGTCCTCGCCTTTACAACCTCGCCCCTCGTTTCCAAAATCACTGCATCATCACCCGGTCTTCCAATTATTCTCATGGAAGCCGATGGGAACTCGACATCATCAAACACACTGGAGGAAATGATTAAGAAAGAACCTAATTTGAGTAGAGTGAGGGAGCAAGTCAACCAAGACGACACAGCTACTCTACTCTACTCATCTGGAACAACAGGACCTAGCAAAGGAGTAGTATCTTCACATAGAAACCTCATAGCAATGGTTCAAACTGTATTTTCTAGGTTTAATGACGAAGAATATGAGCGGGGGGAAACATTCATATGCACAATTCCCATGTTTCACATATACGGTCTAGCAATGTTCGCTGGGCTTCTCTCTTTAGGTTCAACCATCGTTGTTCTCTCCAAGTTTGAAATTCATGACATGCTTTCATCCATAGAGAAGTTCAAAGTCACGTTCCTACCGCTTGTACCACCCATATTGGTTGCTATGCTCAACAATGCTGATGCTATTAAGATCAAATACGACTTGAGTTCTCTTCATATGGTGTTATGCGGTGGGGCTCCTCTTAGCAAAGAGGTTACAGAAGGGTTTGTTGATAAGTACCCTAATGTTGCCATTCTTCAAGGTTATGGTCTGACAGAATCCTTTGGAGCTGGGGCTTCCACTGATTCTTTAGAAGAGAGTCGTAAGTACGGCACGGCGGGGCTTTTGTCTTCCTCTACTGAGGCTATCATTGTCGACACCGAAACTGGTAAACTGCTCCCAGTTAATCAGACCGGTGAGCTTTGGCTTAGGGGTCCTACCATCATGAAAGGTTATTTAAATAACGAGGAGGCAACTAAATCAACCCTTACTTCAGAAGGTTGGCTAAGAACAGGGGATCTTTGCTATATTGATAGTGATGGATTCTTATTTGTGGTTGATAGGTTGAAAGAGCTAATTAAATACAAGGGGTATCAGGTCCCTCCAGCTGAACTAGAGGCTTTGTTGCTAACTCATCCTGCAATTTTAGATGCTGCTGTCATACCCTATCCAGATAAGGAGGCTGGGCAATATCCAATGGCATATGTGGTAAGGAAGGATGGAAGCAACATATCAGAAACCCAAGTTATGGAATTTGTTGCAGGCCAGGTGGCTCCGTACAAAAGAATTCGAAAAGTTGCATTCATACCTTCCATACCCAAAAATCCATCTGGTAAAATTCTTCGGAGGGATCTCATCAAACTCGCTACTTCTAAACTCTGA 1656 0.4457 MEVQDDNKNSRINPTSGFCSSNSIFYSKRKPLLLPPNHSLDATTFISSRAHHGHTAFIDASTGHHFTYKQLWKAVDAVISSLSNMGIKKGDVILLLSPNSIYFPMVCLSVISLGAIITTTNPLNTAHEIAKQIADSKPVLAFTTSPLVSKITASSPGLPIILMEADGNSTSSNTLEEMIKKEPNLSRVREQVNQDDTATLLYSSGTTGPSKGVVSSHRNLIAMVQTVFSRFNDEEYERGETFICTIPMFHIYGLAMFAGLLSLGSTIVVLSKFEIHDMLSSIEKFKVTFLPLVPPILVAMLNNADAIKIKYDLSSLHMVLCGGAPLSKEVTEGFVDKYPNVAILQGYGLTESFGAGASTDSLEESRKYGTAGLLSSSTEAIIVDTETGKLLPVNQTGELWLRGPTIMKGYLNNEEATKSTLTSEGWLRTGDLCYIDSDGFLFVVDRLKELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPDKEAGQYPMAYVVRKDGSNISETQVMEFVAGQVAPYKRIRKVAFIPSIPKNPSGKILRRDLIKLATSKL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03436 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 18 545 - -
Mepo1g03436 551 SUPERFAMILY Acetyl-CoA synthetase-like 47 548 - -
Mepo1g03436 551 Pfam AMP-binding enzyme C-terminal domain 462 537 IPR025110 -
Mepo1g03436 551 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
Mepo1g03436 551 FunFam 4-coumarate--CoA ligase 2 449 550 - -
Mepo1g03436 551 CDD 4CL 34 543 - -
Mepo1g03436 551 FunFam Long-chain-fatty-acid--CoA ligase FadD 26 448 - -
Mepo1g03436 551 Pfam AMP-binding enzyme 49 453 IPR000873 -
Mepo1g03436 551 Gene3D - 449 550 IPR045851 -
Mepo1g03436 551 Gene3D - 22 448 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03436 Mepo-Chr1 39901099 39905139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03436 12 551 Monolignol Biosynthesis Gene Families AT1G20500 65.146 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03436 K10526 - gmx:100811344 836.639