Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03435 ATGCAAACTCCAAGTGGCTTGCTTGGGCCAAAAGCCTTCAGATATTCTACCTTTATCAGCTTCAGAGGTTCAGACACTCGATGTGGTTTTAGTGGCTTCCTCAATAAATATCTGATTGATCGTGGATTCCGCACCTTCTTCGATGATGGGGAGCTTGAAAGAGGGACCCAAATAACGGTAGAAATTCCTAAGGCAATTGAAGAGTCCAGGATTTTCATCCCAGTTTTATCAGAAAATTATGCATCTTCTTCATTTTGCTTAGACGAACTTGTCAAGATCCTTGAAGAGTTTAAAAAAGGAAATGGTCGATGGGTTTTTCCAGTTTTCTATTACGTTAATATCTCTGATGTGAAGAATCAAACTGGCAGTTATGGACAAGCATTGGCTGTTCACAAGAACCGTGTCATGCCTGAGAGGTTTGAGAAATGGATCAACGCCTTGGCTTCAGTCGCTGACTTTCGCGGCTGCCATATGGAAAGGGCAAGGGGTATTTATGAATTCCGGTACATATATGAGATTATTCAAGAGGTCTCTAAACATGTTGCTTGCTCAATTGGCCTGGATCATCGAGTAGAGAAAGTTCTGTGTCATTTGAATTCTAGTCCCAGATCAGACGATGATGGAGTTTGTGTGGTAGGGATATGTGGAGTTCCTGGAATAGGGAAAACGACACTTGCTCGTGGAGTTTATCACTTCGGTGGTGGAACTGAATTTGACTCTTGTTGCTTTTTTGATAATGTGGGAGAGTATGTAAAGAAACATGGATTAGTACATCTCCAACAGATGCTTCTCTCTGCAATAGTTGGACACAGCAACAGTACTATGTTTGAAAATGTGGATGAAAGGGCGTCGAAAATAAAACATATGCTCAACCAAAAGAAGGTTTTCTTGGTTCTTGAAGACGTTCATGATTCTGAGGTCTTGAAAGCCATTGTTAAACTGACTACTTTCTTTGGTTCTGGTAGCAAAGTTGTCATTACAGCAACGGAGAAATGCTTTCTAGAACTTCATGGCATTAAAAGAATATATGAGGTAGAACGAATGAATAAGGTAGAGGCTTTTCAATTGCTTAATCTGAAAGCTTTTGATTCTATGAGCATTAGTCCTTGTTATATGACCATTTTAGAGGGTCTTGAAACTTATGCCTCTGGGCATCCGTTCGTTTTGGAAGTGATAGGTTCCTACTTGAGTGGGAAAAGTATGGAAGAATGTGAATCTGCATTGCACCAGTATAAAGAAATTTCAAACAGAGACATCAAGAAGATTCTACAAGTAAGCTTTGACGCTTTGGAGAAATCTCAGCAGAATATGTTAATTCACATTGCACTTCACCTCAGAGAACAAGAATTGGAAATGGTTGAAAACTTGCTTCATCGTAAATATGGAGTGTGCCCGAAAGATGATATTAGAGTGTTGCTTAATAAATCTCTCATAAAGATTAATGAGAATGGTCAGGTGATATTACATGTCTTGACACAAGACATGGTTAGAGATGATATTCCAGTAGAAGATCTTGGCTAA 1521 0.3938 MQTPSGLLGPKAFRYSTFISFRGSDTRCGFSGFLNKYLIDRGFRTFFDDGELERGTQITVEIPKAIEESRIFIPVLSENYASSSFCLDELVKILEEFKKGNGRWVFPVFYYVNISDVKNQTGSYGQALAVHKNRVMPERFEKWINALASVADFRGCHMERARGIYEFRYIYEIIQEVSKHVACSIGLDHRVEKVLCHLNSSPRSDDDGVCVVGICGVPGIGKTTLARGVYHFGGGTEFDSCCFFDNVGEYVKKHGLVHLQQMLLSAIVGHSNSTMFENVDERASKIKHMLNQKKVFLVLEDVHDSEVLKAIVKLTTFFGSGSKVVITATEKCFLELHGIKRIYEVERMNKVEAFQLLNLKAFDSMSISPCYMTILEGLETYASGHPFVLEVIGSYLSGKSMEECESALHQYKEISNRDIKKILQVSFDALEKSQQNMLIHIALHLREQELEMVENLLHRKYGVCPKDDIRVLLNKSLIKINENGQVILHVLTQDMVRDDIPVEDLG 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03435 506 Gene3D - 12 176 IPR035897 -
Mepo1g03435 506 Pfam TIR domain 15 181 IPR000157 GO:0007165
Mepo1g03435 506 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 155 IPR035897 -
Mepo1g03435 506 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 500 IPR044974 GO:0006952
Mepo1g03435 506 Pfam NB-ARC domain 190 429 IPR002182 GO:0043531
Mepo1g03435 506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 440 IPR027417 -
Mepo1g03435 506 SMART till_3 14 153 IPR000157 GO:0007165
Mepo1g03435 506 Gene3D - 348 431 IPR042197 -
Mepo1g03435 506 PRINTS Disease resistance protein signature 289 303 - -
Mepo1g03435 506 PRINTS Disease resistance protein signature 211 226 - -
Mepo1g03435 506 PRINTS Disease resistance protein signature 382 396 - -
Mepo1g03435 506 ProSiteProfiles TIR domain profile. 13 181 IPR000157 GO:0007165
Mepo1g03435 506 SUPERFAMILY "Winged helix" DNA-binding domain 418 488 IPR036390 -
Mepo1g03435 506 Gene3D - 177 339 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03435 Mepo-Chr1 39876504 39881669 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03435 212 497 WRKY Transcription Factor Family AT5G45050 33.218 5.14e-33 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03435 - - mtr:11444571 968.378