Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03434 ATGGGTGGTTCAGGTACCTACGATGTGTTCATCAGCTTTAGAGGGGAGGATACTCGGCTAGGGTTTACTGGATTTCTGTACAATACTCTATCTGAAAAGGGATTCCACACCTTCATTGACCACCACGCTGACGCGGGAAGAGGAATAACGAAGACACTTGTAGATGCAATTGAAGAGTCCAGGATTGGGATTGTTGTTTTTTCTGAGAACTATGCTTCTTCAACATGGTGTTTGGAAGAACTTTCCTGCATTCTTGACTCATTTTCCAAGAAGAACAACATCCTTCGATCTGTTTTCCCAGTATTTTACAACGTAGATCCTTCTCACGTCCGACATCAGAGTGGGATTTATGGACAGGCACTTGACTCGCACCAGAAGAACAACAACTTCAATTCTGATAAATTGAACAAATGGAAGAACGCTCTTAAACAAGCAGCTAATTTGTCCGGTTTCCATTTTAAACATGGGGATGGATATGAATATGAATTAATTGACAAGATTGTAGACTTGGTCTCCACCAAAATTGATTCCACCCCTTATTTACGTGTTGTCGATCACCCAATTGGTCTCAATTATCGAGTGTTAGAAGTAAACTGGCTTCTCAATCATAATAATACTCATGCTGCTACTGCCGTCCCATCCCATGGACTCAAACTGCTCGGTATCTACGGCATCCCTGGAATAGGGAAGACAACCCTTGCTCGAGCTCTATTTAATTTCATTTCCCCCCAATTTGATGCCTTTTGTTTCCTCCAAGATGTCAGAGAAAATTCAGCAAACCGCGGCTTAGTACATCTTCAACAGACTCTTCTCTCCACCTTAGCTGGACAGACGAAGAAGAAGAAAGACTTCCAATTAGCAAGCATCGGTGAAGGACTTCTGCTATTAAAGAATATGCTCCACCGCAAGAAGGTCCTTTTGGTTCTTGATGACGTTAACAGCTCAGATCAGTTGCAAGCTACTCTTGGAGGAGGCCTCAACTCTTTTGGATATGGAACCACCATCATCATTACTACCCGGGACAAACACTTCCTAACAACTCACGGGGTTCATACAACATACAAGGTAGAGGAGTTGACCAAGGACGAATCCCTCGAGTTGCTTTGTTGGAATGCTTTCAAGACAAACAAAATTTATCCAGATTATATGGACCTGTTAAACCGTTTTACAGCTTGCGCATCTGGCCTTCCTTTGGCTTTGGAGGTTATAGGCTCATACCTGCATGGGAAAGGAGTAAAAGAATGGGAATCTGCATTAGACTCCTATGAAAAGACTCCTTCTAAAGATATCCAAACCATACTTAAGCTAACCTACGATGCTTTGGATGGAGATCTCAAGCAAGTTTTTCTCGACATCGCATGTTTCTTCAAAGGATACAAACTCTCAGAGGTTGAATTCCTACTCAGTGCTCACCACGGTAACTGCTTCAAACCCCACCGTTTCAAATTCTTGCTGGAAACATCTCTCATCAAGATTGACGAGCACAATCATGTGAAAATGCATGACTTGATACGGGACATGGCCAGAGAAATCGTGAGGCAGGAATCACCCGACCACCCCGGCAAACGCAGCAGGCTATGGCTTACTACGGATATCGTCCAAGTTTTAGAAAAAAACACGGGAACAAGTGAAATTCAAACCATCGTTCTGGATTTCCCCAAATATGAAAAAATGGTACAGTGGGACGGAAAAGCCTTCCAGAAGATGACAAGCCTCCAGACACTTATTATTAGAAGTCCGTGTTTTGCTGAAGGTCCGAAGAATCTTCCAAATAGTTTAAGAGTGCTGGAGTGGTGGGGATATCCTTCACAGTCTTTGCCTTCTTATTTTTACCCCAAGAAACTAGCTGTTTTGAAGTTACCGCACAGTTCCTTTATGTCACTGGAACTGTCCAAGTCAAAGAAGTTCGTAAATATGACATTTTTGAATTTCGATGAATGTAAAATTATAACACATATGCCTGATGTATCTGGTGCCCCAAACTTAGAAAGGTTGTCTCTTGATTGTTGTGAGAATTTAGTTGAAATTCACGACTCTGTTGGATTCTTGGATAAACTTGAAATTCTGAATCTTGGGAGTTGTGCAAAGCTTCGGAATTTGCCACCCATCCATCTGACCTCTCTCCAACACCTCAATCTTTCACATTGTTCAAGTCTTGTGAGTTTTCCTGAGATATTAGGAAATATGAAAAATATTACAAGTCTTTCTTTGGAGTACACTGCCATAAGGGAATTTCCATATTCAATTGGAAATCTTCCCCGACTTAAAAGTTTAGAACTGCACGGATGTGGAAATCTTCTGTTACCAAGTAGCATTATTCTATTGTCAGAACTTGAGGAGTTGAGTATTTGGCAATGTGAAGGGTTGAAATCATATAAACAAGACAAAGGTCCAGAAAAAGTTGGTTCAATAGTGTCTTCAAACGTGAAGTATATTGAGTTCTTTTCTTGCAATATATCAGACGACTTCATTCGAATAGGTCTTTCTTGGTTTTCCAATGTGGTAGAATTGAACCTTTCAGCAAACACTTTCACAGTTCTTCCAACATGCATCAAAGAATGCCGCTTTTTGACGATACTTATACTAGATTACTGCAGGCAACTTCGAGAAATCAGAGGAATTCCACCAAATTTAGAAACATTCTCTGCAATACGATGCACATCCTTGAACAATTTAGACCTCACAGATCTTCTCGTGTCCTCCAGAGTCTGTTGTCCTTTGAGAGAGCTTGTTTTGGATGATTGTGAAAGTCTTCAAGAAATTAGAGGGATTCCACCCAGCATAGAACTTTTGTCCGCAAGAAACTGCAGATCCTTGACTATCTCGTGCAGAAGAATGTTACTGATTCAGGAGTTACATGAGGCTGGAAATAAGAGCTTTTGTTTGCCCGGAACACGAATGCCGGAGTGGTTTGAGCACCGTAGCAAAGGACATTCAATTTCTTTTTGGTTTCGTGGCAAGTTCCCTGCAATATCTCTCTGTATTGTCGGACTCATGCATAAAATCCCTACCGGGTTCAGACCCACTGTGATCATCAATGGCAATATAATGAAAACAATGTTGCCAACTGAAAAATGGTTTGATTTTGAGTTCCCAGTGTTAACTGATCATATATTTATTGTTGGTGAAAGACACATAAAATTTGAAGATAATGTGGATGAAGTACTTTCAGAAAATGAATGGAATCATGCAGTGATTTCTATTGATATTGATTTTAAATGGAACTCAAGTGGACAGTTCACTTCGTGGATTGGACTCCATGTGATCAAACAAAAATGCAGCATGGACAGAATTCAATTCACCAATCCTTGCAACCACTAA 3321 0.4077 MGGSGTYDVFISFRGEDTRLGFTGFLYNTLSEKGFHTFIDHHADAGRGITKTLVDAIEESRIGIVVFSENYASSTWCLEELSCILDSFSKKNNILRSVFPVFYNVDPSHVRHQSGIYGQALDSHQKNNNFNSDKLNKWKNALKQAANLSGFHFKHGDGYEYELIDKIVDLVSTKIDSTPYLRVVDHPIGLNYRVLEVNWLLNHNNTHAATAVPSHGLKLLGIYGIPGIGKTTLARALFNFISPQFDAFCFLQDVRENSANRGLVHLQQTLLSTLAGQTKKKKDFQLASIGEGLLLLKNMLHRKKVLLVLDDVNSSDQLQATLGGGLNSFGYGTTIIITTRDKHFLTTHGVHTTYKVEELTKDESLELLCWNAFKTNKIYPDYMDLLNRFTACASGLPLALEVIGSYLHGKGVKEWESALDSYEKTPSKDIQTILKLTYDALDGDLKQVFLDIACFFKGYKLSEVEFLLSAHHGNCFKPHRFKFLLETSLIKIDEHNHVKMHDLIRDMAREIVRQESPDHPGKRSRLWLTTDIVQVLEKNTGTSEIQTIVLDFPKYEKMVQWDGKAFQKMTSLQTLIIRSPCFAEGPKNLPNSLRVLEWWGYPSQSLPSYFYPKKLAVLKLPHSSFMSLELSKSKKFVNMTFLNFDECKIITHMPDVSGAPNLERLSLDCCENLVEIHDSVGFLDKLEILNLGSCAKLRNLPPIHLTSLQHLNLSHCSSLVSFPEILGNMKNITSLSLEYTAIREFPYSIGNLPRLKSLELHGCGNLLLPSSIILLSELEELSIWQCEGLKSYKQDKGPEKVGSIVSSNVKYIEFFSCNISDDFIRIGLSWFSNVVELNLSANTFTVLPTCIKECRFLTILILDYCRQLREIRGIPPNLETFSAIRCTSLNNLDLTDLLVSSRVCCPLRELVLDDCESLQEIRGIPPSIELLSARNCRSLTISCRRMLLIQELHEAGNKSFCLPGTRMPEWFEHRSKGHSISFWFRGKFPAISLCIVGLMHKIPTGFRPTVIINGNIMKTMLPTEKWFDFEFPVLTDHIFIVGERHIKFEDNVDEVLSENEWNHAVISIDIDFKWNSSGQFTSWIGLHVIKQKCSMDRIQFTNPCNH 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03434 1106 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 786 IPR044974 GO:0006952
Mepo1g03434 1106 Pfam NB-ARC domain 216 442 IPR002182 GO:0043531
Mepo1g03434 1106 Gene3D - 4 180 IPR035897 -
Mepo1g03434 1106 Gene3D - 199 352 IPR027417 -
Mepo1g03434 1106 ProSiteProfiles TIR domain profile. 5 175 IPR000157 GO:0007165
Mepo1g03434 1106 Gene3D Ribonuclease Inhibitor 704 791 IPR032675 -
Mepo1g03434 1106 Pfam TIR domain 7 175 IPR000157 GO:0007165
Mepo1g03434 1106 SUPERFAMILY L domain-like 566 893 - -
Mepo1g03434 1106 PRINTS Disease resistance protein signature 299 313 - -
Mepo1g03434 1106 PRINTS Disease resistance protein signature 703 719 - -
Mepo1g03434 1106 PRINTS Disease resistance protein signature 393 407 - -
Mepo1g03434 1106 PRINTS Disease resistance protein signature 219 234 - -
Mepo1g03434 1106 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 177 - -
Mepo1g03434 1106 Gene3D - 358 442 IPR042197 -
Mepo1g03434 1106 SMART till_3 6 148 IPR000157 GO:0007165
Mepo1g03434 1106 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 151 IPR035897 -
Mepo1g03434 1106 SMART AAA_5 216 362 IPR003593 GO:0016887
Mepo1g03434 1106 Gene3D Ribonuclease Inhibitor 555 703 IPR032675 -
Mepo1g03434 1106 Gene3D Ribonuclease Inhibitor 792 954 IPR032675 -
Mepo1g03434 1106 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 452 IPR027417 -
Mepo1g03434 1106 SUPERFAMILY "Winged helix" DNA-binding domain 429 537 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03434 Mepo-Chr1 39860212 39865471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03434 4 792 WRKY Transcription Factor Family AT4G12020 31.235 4.36e-80 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03434 - - mtr:11444105 2084.3