Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03433 ATGAACACCTTCAGTAACTTGCGTGGTCCAAAACCCTCAACATATGGCGTTTTCATCAGCTGCGGTGATGACACACGCTGCAGTTTCACCGGCTTCCTCTCTCATTCTCTCAATGATCGTGGCTTCTACACAGTTATTAATCATCGGGATGCAATTCAACACTGCAGAATTTTCATTTTCATCATATCCCGTGATTACGCGTCTCGGTTAGATGAACTTGTCAACATCATGGATTTGTTTGCAAAGGGGAACGGTCGACAACGGATTTTGCCGGTTTACTATCATGTCAATCCCTCCGATGTTCGGCATCAGAGTGGTGGCTTTGGAGAAGCGTTGTCTTCTGTTTATAACAATCTTCTCATATCTGATTTTGAGATTGAAAAACGGAACACTGTTCTTCGTCAAGTTGCTGATTTTCGGGGCTGGCATCTCGATCCAGCCAGGGGTATATATGAACACCAGTACATTGAGGAGATTCTTCAAGAGGTCTCTAAACACATGGCTTGCTCAATTGGCCTTGATCATCGAGTGGAGAAAGTGATGTGTTGTTTGAATTACGGATCCAATGATGATGGAGTCTGCGTGGTTGGGATATGTGGAGGTCCTGGATTTGGGAAAACAACACTAGCTCGTGGAGTTTATCACTTCTGCGGCGGCATTGACTTTGAGTGTTGTTTCTTTTTTGATAATGTGGGGGAGCATTTAAAGAAACATGGATTAGTTCATCTCCAACAGATGCTTCTCTCTGAAATAGTTGGACACCACGCCGGTACTATGTTTGAAAGTTTGGATAAAGGGATCTCCTCATCAACGATAAAACACATGCTCGACCAAAAGAAGGTTTTCTTGATTATTGAAGATGTTCATGATTCGGAGGTCTTGCGAGCCATTGTTGAACTTACTACTTTCTTTGGTTCTGGTAGCAAGGTCATCATTACTACTCAGGACAAACATCTGCTAGAACTTCATGGGATTGAAATAATATACGAGGTAGAAAAGTTGGATAAGAAAGAGGCTTTTCAGTTGCTTAGTTTGAAGGCTTTCAAATCTATGAATTTTAAATCTAATTATTTGAGCATTTTAGAACGAGCAGAAATTTATGCTTCTGGCCATCCATTCCTTTTGGAGTTTATAGGTTCCAACTTGGGTGGAAAAGATGTAGAAGAGTGTGAATTTGTACTAGACCAATACGAAATGATTCCAAATCACGAGATCCAAAAGATACTTCAAGTTAACTTTGATGCCTTGGGGAAACATTGCCAGAGGATGTTGATTAACATTGCAAATCAGCCCAAAGAACAGGAATTGTCATTGGTTGAAGACACACTTTATAAAATGTATGGCGCCTGCCCAAAACAAGATATCAGAGTCTTATTTGATAAAGCTTTTATAAAGAGTAATGAGCTCGGTCGAGTGAAATTACATGGTTTGACACTTGACATGGTTAGAGAAAATTCCCCCCTCGAATATCCCTGCAAACATAGTAGGTTGCAGAAGGACATTCTAGAAGAAAATATGGAATATCCCTGCAAACGCAGTAGGTCGTCTAAGGATACTTTGGAAGAAACTGTGGAATACCACAAGCAAGAAATCCCACCCTCCTCAAATGATGGAAGCATGATGAGGGATCCGATGGAGTTGGAATATCAACCATGTTCTTCCTCCTCTTCTCAAAGATCCATTCTCCATATTTCTGAGGTGTAA 1704 0.4096 MNTFSNLRGPKPSTYGVFISCGDDTRCSFTGFLSHSLNDRGFYTVINHRDAIQHCRIFIFIISRDYASRLDELVNIMDLFAKGNGRQRILPVYYHVNPSDVRHQSGGFGEALSSVYNNLLISDFEIEKRNTVLRQVADFRGWHLDPARGIYEHQYIEEILQEVSKHMACSIGLDHRVEKVMCCLNYGSNDDGVCVVGICGGPGFGKTTLARGVYHFCGGIDFECCFFFDNVGEHLKKHGLVHLQQMLLSEIVGHHAGTMFESLDKGISSSTIKHMLDQKKVFLIIEDVHDSEVLRAIVELTTFFGSGSKVIITTQDKHLLELHGIEIIYEVEKLDKKEAFQLLSLKAFKSMNFKSNYLSILERAEIYASGHPFLLEFIGSNLGGKDVEECEFVLDQYEMIPNHEIQKILQVNFDALGKHCQRMLINIANQPKEQELSLVEDTLYKMYGACPKQDIRVLFDKAFIKSNELGRVKLHGLTLDMVRENSPLEYPCKHSRLQKDILEENMEYPCKRSRSSKDTLEETVEYHKQEIPPSSNDGSMMRDPMELEYQPCSSSSSQRSILHISEV 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03433 567 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 425 IPR027417 -
Mepo1g03433 567 Pfam NB-ARC domain 175 395 IPR002182 GO:0043531
Mepo1g03433 567 Gene3D - 2 128 IPR035897 -
Mepo1g03433 567 Pfam TIR domain 23 119 IPR000157 GO:0007165
Mepo1g03433 567 ProSiteProfiles TIR domain profile. 1 167 IPR000157 GO:0007165
Mepo1g03433 567 SMART till_3 14 139 IPR000157 GO:0007165
Mepo1g03433 567 PRINTS Disease resistance protein signature 275 289 - -
Mepo1g03433 567 PRINTS Disease resistance protein signature 368 382 - -
Mepo1g03433 567 PRINTS Disease resistance protein signature 195 210 - -
Mepo1g03433 567 Gene3D - 333 417 IPR042197 -
Mepo1g03433 567 Gene3D - 153 326 IPR027417 -
Mepo1g03433 567 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 123 IPR035897 -
Mepo1g03433 567 SUPERFAMILY "Winged helix" DNA-binding domain 404 472 IPR036390 -
Mepo1g03433 567 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 500 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03433 Mepo-Chr1 39842867 39847261 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03433 15 380 WRKY Transcription Factor Family AT4G12020 24.468 3.77e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03433 - - mtr:11445264 1070.84