Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g03432 | ATGGTGCCATTTAGGTCTATTATTAAAGAAGCATGCGAGAAAGCATTAATTGTTGCAAAGTTCTTTTGCGTTTTACACATTACCAACAAATATCTGATCGATCCTGTTCAGACTATTGGTCCTAGCATGCTTCCTACAATCGATGTGACACCAAGCCTCTATCTTGCTGAAAGGATCTCACCTCGATTTGGCAAAGTTGCTCAGGGAGATATTGTAATCCTCCGCTCAGCTCGTAACCCTAGAATGTGCATCACAAAGCGCTTGGTTGGATTAGAGGGTGATACCATCACATATGTTGCTGATCCTAATAACGATGATAAGCAGGAGACAGTTGTGGTTCCCAAGGGTCATGTTTGGATAGAGGGTGATAACAAATATAAAAGCAACGATTCTAGAAATTTTGGTCCAGTTCCTTATGGCCTTATTGAGAATAGGTTATTCTGGAAGGTATCTCCACTTAAAGATTTTGGATCGTTCCGGAATAAATGA | 489 | 0.4049 | MVPFRSIIKEACEKALIVAKFFCVLHITNKYLIDPVQTIGPSMLPTIDVTPSLYLAERISPRFGKVAQGDIVILRSARNPRMCITKRLVGLEGDTITYVADPNNDDKQETVVVPKGHVWIEGDNKYKSNDSRNFGPVPYGLIENRLFWKVSPLKDFGSFRNK | 162 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g03432 | 162 | PANTHER | PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED | 1 | 161 | - | - | |
Mepo1g03432 | 162 | Gene3D | Umud Fragment, subunit A | 28 | 160 | - | - | |
Mepo1g03432 | 162 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 31 | 47 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Mepo1g03432 | 162 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 84 | 96 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Mepo1g03432 | 162 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 113 | 132 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Mepo1g03432 | 162 | Pfam | Signal peptidase, peptidase S26 | 20 | 99 | IPR019533 | GO:0004252|GO:0006465 | |
Mepo1g03432 | 162 | Pfam | Signal peptidase, peptidase S26 | 108 | 146 | IPR019533 | GO:0004252|GO:0006465 | |
Mepo1g03432 | 162 | CDD | S26_SPase_I | 35 | 142 | IPR019533 | GO:0004252|GO:0006465 | |
Mepo1g03432 | 162 | ProSitePatterns | Signal peptidases I signature 3. | 118 | 131 | IPR019758 | GO:0004252|GO:0016020 | |
Mepo1g03432 | 162 | FunFam | Inner membrane protease subunit 1 | 29 | 158 | - | - | |
Mepo1g03432 | 162 | SUPERFAMILY | LexA/Signal peptidase | 31 | 159 | IPR036286 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g03432 | Mepo-Chr1 | 39818129 | 39822325 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g03432 | 43 | 157 | MADS-box Gene Family | AT1G29960 | 51.304 | 1.57e-40 | 131 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g03432 | K09647 | - | csin:114265272 | 213.386 |