Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03431 ATGGTACCATTTAGCTCTATTATGAAAAAAGTATGGAAGGATGCATTCTTTGTTGTAAAAGTCTACTGTCTTTTACATGTTACTGAGAGCTATCTCATCACTCTTGTTAAGACTGAGGGTGTTAGCATGCTACCTACTATTGATTCGACACCAAGCATGTTTCTTGCTGAAAAAATCTCACCTCGATTTGGTAAAGTTGCTCACGGAGATATTGTACGTTTACGCTCTCCTCAAAACCCTAGAGAGTGCTACGGAAAGCGCGTGATTGGATTAGAGGGTGATAGCATTACATATGTTGCTGATCGTGGAAATGGCTATAAGCATAAAACAGTTGTGGTTCCAAAGGGTCATGTTTGGGTAGAGGGTGATAACAAATTTAGTAGCTATGACTCTAGAAGTTTCGGTCCAGTTCCTTATGGCCTTATTGATAGTAAGATATTCTGGAGGGTATGGCCGCGTAAAGATTTTGGATCGTTCTGGAATAAATGA 489 0.3988 MVPFSSIMKKVWKDAFFVVKVYCLLHVTESYLITLVKTEGVSMLPTIDSTPSMFLAEKISPRFGKVAHGDIVRLRSPQNPRECYGKRVIGLEGDSITYVADRGNGYKHKTVVVPKGHVWVEGDNKFSSYDSRSFGPVPYGLIDSKIFWRVWPRKDFGSFWNK 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03431 162 FunFam Inner membrane protease subunit 1 29 158 - -
Mepo1g03431 162 PRINTS Bacterial leader peptidase 1 (S26A) family signature 84 96 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo1g03431 162 PRINTS Bacterial leader peptidase 1 (S26A) family signature 113 132 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo1g03431 162 PRINTS Bacterial leader peptidase 1 (S26A) family signature 31 47 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo1g03431 162 Pfam Signal peptidase, peptidase S26 110 151 IPR019533 GO:0004252|GO:0006465
Mepo1g03431 162 Pfam Signal peptidase, peptidase S26 18 100 IPR019533 GO:0004252|GO:0006465
Mepo1g03431 162 SUPERFAMILY LexA/Signal peptidase 30 160 IPR036286 -
Mepo1g03431 162 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 160 - -
Mepo1g03431 162 CDD S26_SPase_I 35 142 IPR019533 GO:0004252|GO:0006465
Mepo1g03431 162 ProSitePatterns Signal peptidases I signature 3. 118 131 IPR019758 GO:0004252|GO:0016020
Mepo1g03431 162 Gene3D Umud Fragment, subunit A 28 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03431 Mepo-Chr1 39814103 39815824 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03431 43 159 MADS-box Gene Family AT1G29960 52.137 1.16e-39 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03431 K09647 - gmx:100805997 192.586