Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03430 ATGCATGCAGTAGTCTTTTATAGAGAGGAAAACCTAGCTGGAGAGAGGAAAAAGGTAATAACGGTATTGAGAAACATGGTATCATTTAGGTCTATTGTTAAAGAAGTATGGAATGGTGCATTCGATGTTGTGAAGTTTTCCTGCGTTTTACATGTTATCGAGAACTATCTGATCACTCCTATTAAGGTTCCAAAGGGTCACGTTTGGGTAGAGGGTGATAACAAACTTAATAGCTACGACTCTAGAAGTTTCGGTCCAGTTCCTTATGGCCTTATCGAGAGTAGGATATTCTGGAAGGTATCTCCATTTAAAGATTTTGGATCATTCCAGAGTAAATGA 339 0.3835 MHAVVFYREENLAGERKKVITVLRNMVSFRSIVKEVWNGAFDVVKFSCVLHVIENYLITPIKVPKGHVWVEGDNKLNSYDSRSFGPVPYGLIESRIFWKVSPFKDFGSFQSK 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03430 112 CDD S26_SPase_I 68 96 IPR019533 GO:0004252|GO:0006465
Mepo1g03430 112 Pfam Signal peptidase, peptidase S26 56 95 IPR019533 GO:0004252|GO:0006465
Mepo1g03430 112 ProSitePatterns Signal peptidases I signature 3. 68 81 IPR019758 GO:0004252|GO:0016020
Mepo1g03430 112 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 61 111 - -
Mepo1g03430 112 SUPERFAMILY LexA/Signal peptidase 47 109 IPR036286 -
Mepo1g03430 112 Gene3D Umud Fragment, subunit A 2 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03430 Mepo-Chr1 39801554 39802511 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03430 61 109 MADS-box Gene Family AT1G29960 63.265 4.21e-17 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03430 K09647 - dcr:108197830 84.3445