Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03423 ATGACTTACTTTAAGAACACAATAGGTGAAACTTCTGAGCCACTGCTAGCACAGAAAGTTGAAACAAAACAAACAGGACTAGGTCATGCTACTTTTCTCAGCAAGTTGATTTTCTCTTGGGTTAACTCTTTACTCAGTTTAGGTTACTCAAAGCCACTAGCTCTTGAAGACATTCCTTCCCTTGTTTCTGAAGATGAAGCAGACATGGCCTATCAAAAATTTGCAAAAGCATGGGAATCCCTTGTAAGAGAAAGGACTAAGAACAATGCAAAAAGCTTGGTTCTTTGGTCTATAGTTAGAACTTACTTAGAAGAAAACATATTAATAGCATTTTATGCATTAATTAGAACTATAGCTGTTGTAGTTTCACCTCTAATACTCTATGCTTTTGTTAACTACTCAAATAGAACTGAGGAAGATCTCAAACAAGGTCTTTCCATAGTTGGTTTTTTGGTTGTCACTAAAGTCTTTGAGTCGTTATCTCAAAGACATTGGTTTTTTAGCTCAAAGAGGTCAGGTATGAAAATGAGATCAGCTCTGATGCTGGCAGTTTATCATAAGCAGCTAAAGCTTTCAAGCTCGGCAAGAACAAGACACTCGGCCGGAGAAATTGTGAATTACATTGCAGTTGATGCTTATAGAATGGGAGAATTTCCATGGTGGTTTCATATAGCATGGACTTCTGTATTGCAACTTGTTCTTTCCATTGGTGTCCTTTTTATTGTTGTTGGTATTGGTGCTCTTCCTGGTTTAGTCCCTCTTCTTATATGTGGATTTCTCAATGTACCATTAGGAAGGATCCTACAAAATTGTAGGTCACAGTTTATGATTGCACAGGATGAACGTCTTCGATCAACTTCGGAGATTCTAAATAGTATGAAGATCATCAAGTTACAATCATGGGAAGAAAAATTCAAGAGCTTAGTCGAGTCGCTACGTGATAAAGAGTTCATATGGTTGTCCAAGACACAAATCCTGAAATCTTATAGTTCATTTCTTTTTTGGATGTCTCCTACAGTTATATCTGCTGTTGTTTTCCTTGGATGTGCTGTTACCAAGAGTGCACCATTGAATGCTGAAACCATTTTCACAGTTCTTGCAACATTGGGGAACATGGGAGAGCCTATTATAATGTTCCCTGAGGCTCTATCCACTATGATTCAAGTTAAGGTTTCGTTTGATCGTCTTAATAGCTTTTTGATTGCTGAAGAACTAAACAATGATGATAGTAAGAGAAACTCAACGCAATGTTTGGTTAATACCGTGGAGATTCAAGATGGTAACTTCATTTGGGATCATGAATCTCTATCTCCAACTTTAACAAATGTGAATTTAGATATCAAATGGAGACAAAAAATTGCAGTTTGCGGAGCAGTGGGATCTGGAAAATCATCTCTTTTGTATGCAATACTTGGAGAGATTTCCAAGATTCAAGGAACTATTAATGTAGGTGGCACACTAGCCTATGTCTCTCAAACATCTTGGATACAAAGTGGAACAGTTCAAGATAATATACTATTTGGCAAGGCAATGGACAAAACAAGATATGAGAAAGCAATTAAAGCTTGTGCTTTAGATAAGGATATCAATGATTTTAGCCATGGCGATCTGACAGAAATAGGTGAGAGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGAATTCAGCTTGCTAGAGCAGTCTACAATGATGCTGATATCTATCTCCTTGATGATCCTTTCAGTGCAGTTGATGCTCATACAGCTGCAATACTATTCAATGACTGTGTCATGACTGCTTTAAGAGACAAAACAGTCATTCTAGTTACTCATCAAGTGGAGTTTCTCTCGGAAGTCGATACTATCTTGGTAATGGAGGATGGAAAAGTTATTCAAACAGGTAGTTATGAGAATCTCCTAAAAGCTGGGACAGCCTTTGAACTACTTGTGAGTGCTCATAAAGACACAATTAATGAGCTTAATCAAGATAGTGAAAATAATGGAGGTTCTGAAAATGAGGTCGTGTCTAACCCTCAAGACTCACATGGTTTTCATCTCACTAAAAATCAAAGTGAAGGAGAGATTTCTAGCATCAAGGGTTCAATTGGTGCACAGCTTACACAGGAGGAAGAAAAAGCGATTGGTAATGTTGGATGGAAGCCATTCTGGGATTATGTTAATTATTCCAAAGGGACATCCATGATGTGTTTCATCATGTTAGCACAATCTGCTTTTTATACTTTTCAATTTGCATCAACCTTTTGGCTTGCTATAGCCATTGAAATTCCAAAAGTAACTAATGCCAACTTGATTGGAGTTTACTCATTAATTTCTTTTGTTAGCGTCGTGTTTGTACATATAAGGACTTACTTGACTGCACTTCTTGGATTAAAAGCTTCTGCTGCTTTCTTCTCAAGCTTCACTACAGCTATCTTCAATGCTCCAATGCTTTTCTTTGATTCAACTCCTGTGGGAAGAATTTTAACTAGAGCTTCATCAGATTTGAGTATTTTGGACTTTGATATACCTTTTTCCATCACCTTTGTAGCATCTGTAGTAATTGAAATTTTGGTGATAATTTGTATAATGGTTTCAGTCACATGGCAAGTTCTTATTGTTGCTGTTCCTGCAATGGTTGCATCAATATATATTCAGCAATATTATCAAGCTTCTTCAAGGGAACTAATACGGATCAACGGAACCACCAAAGCTCCCGTCATGAATTTTGCAGCCGAGACATCGCTTGGAGTAGTTACTGTAAGAGCATTTGGCATGGTAGACAGATTTTTCAAAATCTACTTAAAACTTGTGGACACAGATGCTTCATTGTTCTTTCATTCTAATGTGGCAATGGAATGGGTAGTTATAAGGGTTGAAGCACTTCAAAATTTGACTGTCATCACTGCAGCTTTGCTGATTATTCTACTTCCTCAGGGATATGTATCCCCAGGCCTTGTTGGACTGTCTCTTTCTTATGCATTTACCTTGACAGGAGCCCAAATATTTTGGACTAGATGGTTTTCAAACTTATCAAACCATATTATCTCTGTTGAAAGAATCAAACAATTCATTAACATACCAGCTGAGCCTCCTGCCATAGTGGATCATAACCGACCTCCATCTTCATGGCCTTCCAAGGGCAAGATTGATCTTCAAGGCTTAGAGATTAGATATCGTCCTAATTCTCCGTTAGTCCTTAAGGGAATCACTTGTACATTTAAAGGAGGAAGTAGGGTGGGAGTTGTTGGAAGGACTGGAAGTGGAAAAAGTACACTGATTAGCGCTTTGTTTCGCTTAGTTGAGCCTTCAAGAGGTGATATTCTTATTGATGGGATAAACATTTGCTCAATGGGGTTGAAGGATTTGAGAATGAGGCTAAGCATAATTCCTCAAGAACCAACTCTTTTCAAGGGCAGCATTAGAACAAACCTGGACCCTCTAGGCCTGTACTCAGATGATGAAATATGGAAGGCTGTAGAGAAATGTCAGCTTAAGGAAACAATCAGCAAGCTACCAAGTCTCTTGGACTCTTCTGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAACGCCAATTATTTTGCCTCGGAAGAGTTCTACTCAAGAGGAACAGAATTCTTGTTTTGGATGAAGCTACTGCATCCATTGATTCTGCCACAGATTCCATTCTACAAAGAATAATTAGACAAGAATTTGAAGAACGCACAGTTATAACTGTTGCTCACAGAGTTCCAACTGTAATAGACAGTGACATGGTCATGGTCCTATCTTATGGGAAACTGGTGGAATATGATGAACCTTCAAAGCTAATGGACGCCGACTCTTCATTCTCTAAGCTGGTAGCTGAATATTGGTCCAGTTGCAGGAAAAGTTCCTTCACAAACATTAGCAGACAGCAACAATGA 3885 0.3835 MTYFKNTIGETSEPLLAQKVETKQTGLGHATFLSKLIFSWVNSLLSLGYSKPLALEDIPSLVSEDEADMAYQKFAKAWESLVRERTKNNAKSLVLWSIVRTYLEENILIAFYALIRTIAVVVSPLILYAFVNYSNRTEEDLKQGLSIVGFLVVTKVFESLSQRHWFFSSKRSGMKMRSALMLAVYHKQLKLSSSARTRHSAGEIVNYIAVDAYRMGEFPWWFHIAWTSVLQLVLSIGVLFIVVGIGALPGLVPLLICGFLNVPLGRILQNCRSQFMIAQDERLRSTSEILNSMKIIKLQSWEEKFKSLVESLRDKEFIWLSKTQILKSYSSFLFWMSPTVISAVVFLGCAVTKSAPLNAETIFTVLATLGNMGEPIIMFPEALSTMIQVKVSFDRLNSFLIAEELNNDDSKRNSTQCLVNTVEIQDGNFIWDHESLSPTLTNVNLDIKWRQKIAVCGAVGSGKSSLLYAILGEISKIQGTINVGGTLAYVSQTSWIQSGTVQDNILFGKAMDKTRYEKAIKACALDKDINDFSHGDLTEIGERGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALRDKTVILVTHQVEFLSEVDTILVMEDGKVIQTGSYENLLKAGTAFELLVSAHKDTINELNQDSENNGGSENEVVSNPQDSHGFHLTKNQSEGEISSIKGSIGAQLTQEEEKAIGNVGWKPFWDYVNYSKGTSMMCFIMLAQSAFYTFQFASTFWLAIAIEIPKVTNANLIGVYSLISFVSVVFVHIRTYLTALLGLKASAAFFSSFTTAIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPFSITFVASVVIEILVIICIMVSVTWQVLIVAVPAMVASIYIQQYYQASSRELIRINGTTKAPVMNFAAETSLGVVTVRAFGMVDRFFKIYLKLVDTDASLFFHSNVAMEWVVIRVEALQNLTVITAALLIILLPQGYVSPGLVGLSLSYAFTLTGAQIFWTRWFSNLSNHIISVERIKQFINIPAEPPAIVDHNRPPSSWPSKGKIDLQGLEIRYRPNSPLVLKGITCTFKGGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSMGLKDLRMRLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDSILQRIIRQEFEERTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDADSSFSKLVAEYWSSCRKSSFTNISRQQQ 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03423 1294 SUPERFAMILY ABC transporter transmembrane region 95 396 IPR036640 GO:0005524|GO:0016020
Mepo1g03423 1294 FunFam ABC transporter C family member 3 1025 1276 - -
Mepo1g03423 1294 Pfam ABC transporter 1059 1207 IPR003439 GO:0005524
Mepo1g03423 1294 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 29 1278 - -
Mepo1g03423 1294 Pfam ABC transporter 440 574 IPR003439 GO:0005524
Mepo1g03423 1294 Gene3D - 430 670 IPR027417 -
Mepo1g03423 1294 FunFam Multidrug resistance protein associated1 401 665 - -
Mepo1g03423 1294 Gene3D - 1025 1276 IPR027417 -
Mepo1g03423 1294 SMART AAA_5 1068 1260 IPR003593 GO:0016887
Mepo1g03423 1294 SMART AAA_5 449 622 IPR003593 GO:0016887
Mepo1g03423 1294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 418 643 IPR027417 -
Mepo1g03423 1294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1032 1275 IPR027417 -
Mepo1g03423 1294 SUPERFAMILY ABC transporter transmembrane region 714 1024 IPR036640 GO:0005524|GO:0016020
Mepo1g03423 1294 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 741 992 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g03423 1294 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1044 1276 IPR003439 GO:0005524
Mepo1g03423 1294 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 107 388 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g03423 1294 Pfam ABC transporter transmembrane region 107 368 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g03423 1294 Pfam ABC transporter transmembrane region 762 992 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g03423 1294 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 422 645 IPR003439 GO:0005524
Mepo1g03423 1294 CDD ABCC_MRP_domain2 1040 1260 - -
Mepo1g03423 1294 ProSitePatterns ABC transporters family signature. 547 561 IPR017871 GO:0005524|GO:0016887
Mepo1g03423 1294 CDD ABC_6TM_ABCC_D1 108 396 IPR044746 GO:0140359
Mepo1g03423 1294 FunFam ABC transporter C family member 10 90 404 - -
Mepo1g03423 1294 Gene3D ABC transporter type 1, transmembrane domain 79 411 IPR036640 GO:0005524|GO:0016020
Mepo1g03423 1294 MobiDBLite consensus disorder prediction 653 676 - -
Mepo1g03423 1294 Gene3D ABC transporter type 1, transmembrane domain 691 1023 IPR036640 GO:0005524|GO:0016020
Mepo1g03423 1294 CDD ABC_6TM_ABCC_D2 724 1017 IPR044726 GO:0140359
Mepo1g03423 1294 CDD ABCC_MRP_domain1 422 622 - -
Mepo1g03423 1294 FunFam ABC transporter C family member 5 692 1023 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03423 Mepo-Chr1 39721142 39727744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03423 422 687 Calmodulin-binding Proteins AT2G36910 25.524 4.39e-20 95.5