Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03412 ATGGATCGGGAATGGTCCATCAACGACTTTGAGATCGGAAAGCCACTCGGGAAAGGCAAATTCGGCAGAGTCTACGTCGCCAGAGAAGTCAAGAGTAAATTTGTGGTTGCATTGAAGGTTATCTTTAAGGAACAACTTGAAAAGTACAAATTTCACCATCAATTGAGGAGGGAAATGGAGATACAGATAAGTCTTAAACATCCAAACGTCTTGCGTCTCTATGGTTGGTTTCATGATTCTGAGCGCGTTTTCCTGATTCTTGAATATGCTCATAATGGCGAGCTATACAAGGAACTTAACAAAAGAGGTCATTTCTCAGAGAAGCAAGCTGCAACGTACATTTTAAGCCTCACAGAAGCATTGACATATTGTCACGAGAACCATGTTATTCACAGAGATATCAAGCCTGAAAATTTGTTGCTTGATCATGAGGGTCGTCTAAAGATTGCAGATTTTGGTTGGTCTGTACAATCTAAAGACAAAAGAAAAACCATGTGTGGTACATTGGATTATTTAGCTCCTGAGATGGTAGAAAACAAAACTCATGATTATGCTGTTGATAACTGGACTCTTGGTATCCTTTGCTATGAGTTCCTTTATGGTGTTCCTCCATTTGAGGCCGAGAGTCAAGCTGATACATTCGAAAGGATAAAAAAGGTTGATTTAAGCTTCCCTCCTAGTCCTCTTGTTTCTTCGGATGCCAAAAATCTGATTAGTCGGCTCCTAGTAAAAGATTCCTCAAGAAGGCTCTCACTTCAGAAGATAATGGAGCATCCTTGGATAATCAAGAATGCAAATCGTATGGGTGTATGCTAG 816 0.402 MDREWSINDFEIGKPLGKGKFGRVYVAREVKSKFVVALKVIFKEQLEKYKFHHQLRREMEIQISLKHPNVLRLYGWFHDSERVFLILEYAHNGELYKELNKRGHFSEKQAATYILSLTEALTYCHENHVIHRDIKPENLLLDHEGRLKIADFGWSVQSKDKRKTMCGTLDYLAPEMVENKTHDYAVDNWTLGILCYEFLYGVPPFEAESQADTFERIKKVDLSFPPSPLVSSDAKNLISRLLVKDSSRRLSLQKIMEHPWIIKNANRMGVC 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03412 271 Gene3D Transferase(Phosphotransferase) domain 1 94 269 - -
Mepo1g03412 271 FunFam Serine/threonine-protein kinase ark1 2 270 - -
Mepo1g03412 271 ProSitePatterns Protein kinases ATP-binding region signature. 16 43 IPR017441 GO:0005524
Mepo1g03412 271 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Mepo1g03412 271 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Mepo1g03412 271 ProSiteProfiles Protein kinase domain profile. 10 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03412 271 Pfam Protein kinase domain 10 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03412 271 SUPERFAMILY Protein kinase-like (PK-like) 4 264 IPR011009 -
Mepo1g03412 271 SMART serkin_6 10 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03412 271 CDD STKc_Aurora 9 261 - -
Mepo1g03412 271 PIRSF ILK 1 266 - -
Mepo1g03412 271 FunFam Aurora kinase A 2 93 - -
Mepo1g03412 271 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 3 271 IPR030616 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03412 Mepo-Chr1 39541725 39545661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03412 2 264 CBL-interacting serine-threonine protein kinases AT5G10930 38.519 2.42e-59 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Mepo1g03412 Pkinase 9.8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03412 K08850 - gmx:100775802 496.893