Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03403 ATGGACAAAACAAGATATGAGAAAGCAATTAAAGCTTGTGCTTTAGATAAGGATCTCAATGATTTCAGCCATGGTGATCTTACAGAAATAGGTCAGAGAGGTATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAGCTTGCTAGAGCAGTCTACAATGATGCTGATATCTATCTCCTTGATGATCCTTTCAGTGCAGTTGATGCTCATACAGCTGCAATACTATTCAATGACTGTGTCATGACTGCTTTAAGAGACAAAACAGTCATTCTAGTTACTCATCAAGTGGAGTTTCTCTCAGAAGTCGATACTATCTTGGTAATGGAGGATGGAAAAGTTATTCAATCAGGTAGTTATGAGAATCTCCTAAAAGCTGGAACAGCCTTTGAACTACTTGTGAGTGCGCATAAAGACACAATTAATGAGTTGAATCAAGATAGTGAAAATAATGGAGGTTCTGAAAATGAGGTTTTGTCTAATCCTCAAGACTCTCATGGTTTTCATCTCACTAAAAATCAAAGTGAAGGAGAGATTTCTAGCATCAAGGGTTCAATTGGTGCACAACTTACCCAAGAGGAAGAAAAAGCGATTGGTAATGTTGGATGGAAGCCACTTTGGGATTATATTAATTACTCCAAAGGGACATTGATGTTGTGTTTGGTCATATTAGGACAATGTAGTTTTTTGGCTTTGCAGACTTCATCGAACTTTTGGCTTGCTACAGCCATTGAAATTCCAAAAGTAACTGATGCCACCTTGATTGGAGTTTATGCATTACTCTCTTTTTCTAGTACTTCTTTTGTATATGTAAGGTCTTACTTTGCTGCACTTTTGGGATTAAAAGCTTCTACTGCTTTCTTCTCAAGCTTCACTACATCTATCTTCAATGCTCCAATGCTTTTCTTTGATTCAACTCCTGTAGGAAGAATTTTAACTAGAGCTTCATCAGATTTGAGTATTTTGGACTTTGATATACCTTATTCCCTCACCTGTGTAGCAGTTGTAGCAATTGAAGTTTTGGTGATGATTTTTGTGATTGCTTCAGTCACATGGCAAGTTCTGATTGTTGCTGTTCCTGCAATGGTTGCATCAATATTCATTCAGCAATATTATCAAGCCACTGCAAGGGAACTAATACGGATCAACGGAACCACCAAAGCTCCAGTCATGAATTTTGCAGCCGAGACATCGCTTGGAGTGGTTACTGTACGAGCATTCAACATGGTAGACAGATTTTTCAAAACCTACTTAAAACTTGTGGACACAGATGCTTCATTGTTCTTTCATTCCAATGTGGCAATGGAATGGTTAGTTTTAAGGATTGAAGCACTTCTAAATTTGACTGTCATCACTGCAGCTTTGTTACTCATTCTACTTCCTCAAAGATATGTATCCCCAGGCCGTGTGGGATTGTCTCTTTCTTATGCTCTTACCTTGAATGGAGCCCAAATATTTTGGACTAGATGGTTTTCAAACTTATCAAACTACATTATCTCTGTTGAAAGAATCAAGCAATTCATTCACATACCAGCTGAGCCTCCTGCTATTGTGGATAATAACCGGCCACCATCTTCATGGCCTTCCAAGGGCAAGATTGATCTTCAAGGGTTAGAGATTCGATATCGTCCTAATGCTCCATTAGTCCTTAAGGGAATCACTTGTACATTTAAAGGAGGAAGTAGGGTGGGAGTTGTTGGAAGGACTGGAAGTGGAAAAAGTACACTGATTAGCGCTTTGTTCCGCTTAGTTGAGCCTTCAAGAGGTGATATTCTTATTGATGGGATAAACATTTGTTCAATGGGATTAAAGGATTTGAGAATGAAGCTAAGCATAATCCCTCAAGAACCAACTCTTTTCAAGGGCAGCATTAGAACAAACCTGGACCCTCTAGGCCTGTACTCAGATGATGAAATATGGAAGGCTGTAGAGAAATGTCAGCTTAAGGAAACAATCAGCAAGCTGCCAAGTCTCTTGGACTCTTCTGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAACGCCAATTATTTTGCCTCGGAAGAGTTCTACTCAAGAGGAACAGAATTCTTGTTTTGGATGAAGCTACTGCATCCATTGATTCAGCCACAGATGCCATTCTACAAAGAATAATTAGACAAGAATTTAAAGAATGCACAAAAATGTTCAAGAACACATTCCAGTCTGGATTTCTTTCCATATTATACAGCCTTGGGAGCAAACCTTTGCAGATATGGGACAAAGAAGTTGTGGATGGCCATATTAAGCGACCACAAGATGAAGACATACAATCTAATGTACTGGAAATAATTGGATCGAATATTCAGTCCACATACATTACGTGCCCGGCTGACCCAGCTGCCACACTTGGTATAAAACTTCCATTCTTGGTTATGATTGTGAAGAATCTAAAGAAGTACTTCACATTTGAGATTCAAGTTTTGGATGATAAGAATGTCAGACGACGATTTCGAGCTTCTAATTTCCAAGCTGTCACTAGAGTAAAGCCCTACATTTGCACTATGCCATTGAGAATGGATGAGGGTTGGAATCAAATCCAGTTTAACCTGGCTGATTTTACCAAGAGAGCGTACGGGACTAATTATGTGGAGACACTACGCGTACAGGTCCATGCAAACTGTCGCTTGAGAAGGATATACTTTTCTGATCGTCTCTACTCTGAAGAGGAACTCCCACCAGAGTTCAAGTTATACCTTCCAATGCAGAAATAA 2730 0.3941 MDKTRYEKAIKACALDKDLNDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALRDKTVILVTHQVEFLSEVDTILVMEDGKVIQSGSYENLLKAGTAFELLVSAHKDTINELNQDSENNGGSENEVLSNPQDSHGFHLTKNQSEGEISSIKGSIGAQLTQEEEKAIGNVGWKPLWDYINYSKGTLMLCLVILGQCSFLALQTSSNFWLATAIEIPKVTDATLIGVYALLSFSSTSFVYVRSYFAALLGLKASTAFFSSFTTSIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPYSLTCVAVVAIEVLVMIFVIASVTWQVLIVAVPAMVASIFIQQYYQATARELIRINGTTKAPVMNFAAETSLGVVTVRAFNMVDRFFKTYLKLVDTDASLFFHSNVAMEWLVLRIEALLNLTVITAALLLILLPQRYVSPGRVGLSLSYALTLNGAQIFWTRWFSNLSNYIISVERIKQFIHIPAEPPAIVDNNRPPSSWPSKGKIDLQGLEIRYRPNAPLVLKGITCTFKGGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFKECTKMFKNTFQSGFLSILYSLGSKPLQIWDKEVVDGHIKRPQDEDIQSNVLEIIGSNIQSTYITCPADPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRMDEGWNQIQFNLADFTKRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQK 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03403 909 Pfam ABC transporter 27 64 IPR003439 GO:0005524
Mepo1g03403 909 FunFam Multidrug resistance-associated protein member 4 516 723 - -
Mepo1g03403 909 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 133 IPR027417 -
Mepo1g03403 909 SMART AAA_5 558 832 IPR003593 GO:0016887
Mepo1g03403 909 FunFam ABC transporter C family member 5 182 513 - -
Mepo1g03403 909 Gene3D ABC transporter type 1, transmembrane domain 181 513 IPR036640 GO:0005524|GO:0016020
Mepo1g03403 909 Gene3D - 1 157 IPR027417 -
Mepo1g03403 909 Pfam ABC transporter transmembrane region 218 482 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g03403 909 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 522 721 IPR027417 -
Mepo1g03403 909 Gene3D - 515 722 IPR027417 -
Mepo1g03403 909 FunFam Multidrug resistance associated protein, putative 1 69 - -
Mepo1g03403 909 Pfam ABC transporter 549 697 IPR003439 GO:0005524
Mepo1g03403 909 SUPERFAMILY ABC transporter transmembrane region 204 514 IPR036640 GO:0005524|GO:0016020
Mepo1g03403 909 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 719 - -
Mepo1g03403 909 CDD ABCC_MRP_domain2 530 719 - -
Mepo1g03403 909 MobiDBLite consensus disorder prediction 143 166 - -
Mepo1g03403 909 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 220 482 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g03403 909 Pfam CFA20 domain 721 904 IPR007714 -
Mepo1g03403 909 CDD ABC_6TM_ABCC_D2 214 507 IPR044726 GO:0140359
Mepo1g03403 909 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 534 779 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03403 Mepo-Chr1 39405146 39412562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03403 529 713 Calmodulin-binding Proteins AT2G36910 31.383 1.32e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03403 - - gmx:100784827 1122.46