Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03397 ATGAGTGCTTTTCGAGTTCTCTCTACCACTACTATCAAGGCACCAAATGTAGGTGACTCAACTAGTCGTAAAATTGAGTTAACCCCGTGGGATCTTCAGTTCCTCCCATTTGGATCCAACCAAAAGGGGTTTCTTTATCACCATCCCACGGTAGTGAACACGTCCACCATAATCCAACACTTTAAACAGTCTCTTTCCCATGTTCTTGCATTCTTTCCACCCTTTGCAGGTCGTCTTGAAATAACTAAACATGAAGATAATACTATCTCGTGTTCCATCGTATGCAACAATGCCGGTGCACTCTTTGTTCATGCAAAAGCAGAGAACACATGTGTTGCCGACATCCTTGGATCCACGTACCTTCCTTCTGTTTTCCATTCCTTCTTTCCACTTAATGGAGTTATAAACTACGAAGGTACATCACATCCATTGCTTGCATTCCAAGTAACTGAGTTAGTTGACGGTACTTTTGTTAGTTGGACAATGAACCATGTTGTCAATGATGGAATGTCCACTTCGCATTTCATCAATTCATTGGCTGAAATCACACGTGGTTCTTGCCATCAAATATCTGTATCTCCAACACTTGAACGTTTATTTCCAAATGAAATTCAACCTCCCATACGATTTCCTTTCATAATAAAGGCACCACAAATTAAGATCCGTTCTGATGAAGAACAACTCATCCCAACTGAGAGAATATTCCATTTTACAAAGGAGAATATCGCAAGACTCAAATTAAAAGCCAATATAGAAGCTGGTACCAACAAAATATCTTCCATGCAAGCGCTTTGCACCCACCTTTGGCGCTCAGTGATCCGTTCCAAACAACTTGACCCACAAGAAGAAGTGAATTTTGTGTTATGTATAAGTGTTAGATCAAGGTTGGTTCCACCTCTATCATATGATTATTTCGGAAATGCTATGATAGTTTGCGGGGTTACCATGAAAGTCAAGGAGCTATTAGAAGAAGGCGGGCTTGGCAAAGGTGCTTTAGAGATGTACAAGATTATTGCTTTGTACTCTGATGAGAAGTTAAAGAGTCAATATGAATCTTGGTCAAAAACACCAAACTTTGTTAAGCCTGATAGTGTGGCCAATGGTAATTCCTTGGTCATCAGTGGTTCCCCATTGTTCAGTATTTACGATATTGATATTGGTTGGGGAAATCCTGTGTCAATACGAAGTGGTAGTTCAAATAAAAGCAATGGAAAGATTAGTGTGTTTGCTGGTAAAGAAGAAGGAAGTATGGACTTTGAAGTGTGTCTTCCATACATGATTTTGGAGGTCATGGGAAAAGACCCTGAGTTAAACATGACTGATGCATCCACATGGAACCTTGATCCTCTACAACCTTTTTTACTATGCAGTCGGTTGTAG 1380 0.4007 MSAFRVLSTTTIKAPNVGDSTSRKIELTPWDLQFLPFGSNQKGFLYHHPTVVNTSTIIQHFKQSLSHVLAFFPPFAGRLEITKHEDNTISCSIVCNNAGALFVHAKAENTCVADILGSTYLPSVFHSFFPLNGVINYEGTSHPLLAFQVTELVDGTFVSWTMNHVVNDGMSTSHFINSLAEITRGSCHQISVSPTLERLFPNEIQPPIRFPFIIKAPQIKIRSDEEQLIPTERIFHFTKENIARLKLKANIEAGTNKISSMQALCTHLWRSVIRSKQLDPQEEVNFVLCISVRSRLVPPLSYDYFGNAMIVCGVTMKVKELLEEGGLGKGALEMYKIIALYSDEKLKSQYESWSKTPNFVKPDSVANGNSLVISGSPLFSIYDIDIGWGNPVSIRSGSSNKSNGKISVFAGKEEGSMDFEVCLPYMILEVMGKDPELNMTDASTWNLDPLQPFLLCSRL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03397 459 Gene3D - 4 207 IPR023213 -
Mepo1g03397 459 Gene3D - 223 432 IPR023213 -
Mepo1g03397 459 Pfam Transferase family 19 436 - -
Mepo1g03397 459 SUPERFAMILY CoA-dependent acyltransferases 35 192 - -
Mepo1g03397 459 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03397 Mepo-Chr1 39320901 39322280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03397 46 423 Monolignol Biosynthesis Gene Families AT5G48930 27.778 2.89e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03397 - - gmx:100500257 462.225