Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03392 ATGGCATCCTCAAATTCACCATGTGCAGCATGCAAGTTTCTACGCCGCAAATGCCAACCAGAATGTGCATTTGCACCTTATTTTCCACCTGATCAGCCACAAAAATTTGCAAATGTTCATAGAATTTTTGGAGCAAGCAATGTTACAAAGCTTCTCAATGATTTACACCCTCACCAACGTGAAGATGCTGTTAATTCACTTGCTTATGAAGCTGAGATGCGACTTCGTGATCCTGTTTATGGTTGTGTTGGTGTAATTTCTCTCCTTCAACACCAACTTCGTCAGCTTCAAATGGATCTTTATTGTGCTAAATCCGAACTCTCTCGGTTTCAAAACTTGAGCATCGCAGCGGCTACAACCGGTCATGGACTCATAACCGGCATGACAGGTGAATCTGTCACGGCCGCTGCAGGTAATTACCACCACACGCAGACTACTGCAGGTGGTGGTAATAATAGTAACGGCCGTGACCATCGTTATCATCATCATCAACATCATCAGTTTTTTCCAAGGGATCAACATCAACAACATAATTTGGTTAGAAATTTTGATGGTGGAATTGGGAACAACTATGATGCTAGTCTCTTGGCTATGAATATATCTGCTAGCTTAGGACAGATCAATCAACTTCAACATCATAGTGCTGCTGGTGGTGGTGGTGACGACCGCCGTACTGTTAACCGCTCCTAG 690 0.4348 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRFQNLSIAAATTGHGLITGMTGESVTAAAGNYHHTQTTAGGGNNSNGRDHRYHHHQHHQFFPRDQHQQHNLVRNFDGGIGNNYDASLLAMNISASLGQINQLQHHSAAGGGGDDRRTVNRS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03392 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 165 - -
Mepo1g03392 229 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Mepo1g03392 229 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Mepo1g03392 229 MobiDBLite consensus disorder prediction 142 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03392 Mepo-Chr1 39259256 39259945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03392 2 229 AS2 family AT1G65620 60.606 3.75e-78 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo1g03392 LOB 3.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03392 - - mtr:25501092 437.187