Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03364 ATGCGGGATGACTGTAATTACTCAAAACCAAAGGTTCTTAGCAATGCATACAAAACAAATCTCAAAAGCATCCTCTCATATCTATCTGCCGATGCAGCCAAAAGCAAAGGTTATAACTACACCAGCATAGGCGAAAACACAACAAAAGGAGATGCAGTGTATGGTCTCTATGATTGTCGTGGCGATGTATACTATTGTGAATTATGTGTCACTTCTGCCAGCAGAAAAGTTCTTGAGCGCTGCCCCAATAGAGTCTCCGCTACTATAATTTACAGCTTCTGCATTTTGAGGTACTCAAATGAGAATTTCTTTGGGAAAGTCACATCGTACCCTAATTGGACTCATGTTGGATCTAAAACCGTCTCTAATGCAATAGAAATTCAGAAAAGTGAGGATTTGATGAAATTTTTGATCAAAAAAGCAACTACTGGAAACAACCAATTGTATTATATGAGTAGTTTCAATTTGAGTTCTACTGAGGGTAGGTATGGACTGGTTCAATGCAGTAGAGATCTTACAAATGAAAGGTGCAGACAGTGTTTGGAGATTATGTTAGCAATGGTTCCCAAATGTTGTGAACATAAGTTGGGGTGGCGTGTTGGATCTGCTAGTTGTCTGATTAGGTATGATGATTATATGTTCTATCAGAACCTTGAGCAATTCCCTTCAGAACTTGTTCCTGATCCACAAACAGTTACGGCGAAAAAGAAGGGTTCTAGTAAGTCAAGAAACTTGATCATTGCCTTTAGTGTGCTGGGATCAGTAATTCTACTAAGTTTCACTATATACTTCTTCTGGTGCAAGAATAGAGTTAGAAAAGATTGGCTGGCACCTGCATATGAGGAAACATTGAATGTAGATCTGCCTACAATCCCATTGATCACAATTCAACACTGTACTAATAACTTTTCAGAAACATCTAAATTAGGGGAAGGTGGTTTTGGTTCTGTTTACAAGGGAATTCTGCCAGATGGAAGACAAATAGCAGTAAAAAGGCTCTCAAGAACTTCTGGTCAAGGGTCAGAGGAGTTCAAGAATGAAGTAATGTTTATAGCGAAATTGCAACATCGCAACCTTGTAAGACTTTTAGCATGCTGCTTAGAAGGAAATGAAAAGCTACTTGTGTATGAGTTTATGCCGAATGCAAGTCTCGACTTTCACCTGTTTGATAATGAAAAGAGAAAGGAACTAAATTGGAAACTAAGTTTGAGCATTATCAATGGAATAGCTAAAGGTCTTCTATACCTACATGAGGACTCTAGATTAAGAGTAATCCATAGAGATCTCAAAGCTAGCAATGTTCTGTTAGATCATGAAATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTTGACATAGGCCAGAACCAGGCAAATACAAGACGAATAATGGGCACCTATGGATACATGGCTCCAGAATACGCAATGGAAGGAGTATTTTCTGTGAAAACCGATGTATTCAGCTTTGGAGTACTAGTGTTGGAAATCATTAGTGGGAAAAAGAATACTGGATTCTATCTATCAGAACATGGTCAGAGTCTTCTTTTATATACATGGAAAAAATGGTGTGAAGGAACGTGCTTGGAAATAATGGATTCGGTACTTGGAGAATCATGTATCGACGACAATGAGGTTGTGAGGTGCATAAACATTGGTCTTTTGTGTGTTCAAGAAGATGCGGCAGATAGACCAACCATGTCAACTGTTGTTGTTATGTTGGCAAGTGACACAATGATCCTTCCAAAACCCAAACAACCTGCATTTTCAATCGGAAGAATGACCTCTGATGATTCATCTACCTCAAAAAGTTTCAAGGATCCTTCCGTCAATGATGTAACAGTCTCAAACATTTTACCAAGGTAA 1869 0.3852 MRDDCNYSKPKVLSNAYKTNLKSILSYLSADAAKSKGYNYTSIGENTTKGDAVYGLYDCRGDVYYCELCVTSASRKVLERCPNRVSATIIYSFCILRYSNENFFGKVTSYPNWTHVGSKTVSNAIEIQKSEDLMKFLIKKATTGNNQLYYMSSFNLSSTEGRYGLVQCSRDLTNERCRQCLEIMLAMVPKCCEHKLGWRVGSASCLIRYDDYMFYQNLEQFPSELVPDPQTVTAKKKGSSKSRNLIIAFSVLGSVILLSFTIYFFWCKNRVRKDWLAPAYEETLNVDLPTIPLITIQHCTNNFSETSKLGEGGFGSVYKGILPDGRQIAVKRLSRTSGQGSEEFKNEVMFIAKLQHRNLVRLLACCLEGNEKLLVYEFMPNASLDFHLFDNEKRKELNWKLSLSIINGIAKGLLYLHEDSRLRVIHRDLKASNVLLDHEMNPKISDFGLARAFDIGQNQANTRRIMGTYGYMAPEYAMEGVFSVKTDVFSFGVLVLEIISGKKNTGFYLSEHGQSLLLYTWKKWCEGTCLEIMDSVLGESCIDDNEVVRCINIGLLCVQEDAADRPTMSTVVVMLASDTMILPKPKQPAFSIGRMTSDDSSTSKSFKDPSVNDVTVSNILPR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03364 622 FunFam cysteine-rich receptor-like protein kinase 10 379 582 - -
Mepo1g03364 622 CDD STKc_IRAK 309 575 - -
Mepo1g03364 622 ProSiteProfiles Protein kinase domain profile. 303 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03364 622 Pfam Domain of unknown function (DUF3403) 577 622 IPR021820 GO:0004674
Mepo1g03364 622 SMART serkin_6 303 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03364 622 Gene3D Phosphorylase Kinase; domain 1 268 378 - -
Mepo1g03364 622 Pfam Protein tyrosine and serine/threonine kinase 306 573 IPR001245 GO:0004672|GO:0006468
Mepo1g03364 622 ProSiteProfiles Gnk2-homologous domain profile. 1 103 IPR002902 -
Mepo1g03364 622 FunFam Cysteine-rich receptor-like protein kinase 10 112 214 - -
Mepo1g03364 622 MobiDBLite consensus disorder prediction 587 622 - -
Mepo1g03364 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Mepo1g03364 622 Gene3D - 3 103 IPR038408 -
Mepo1g03364 622 Gene3D - 115 214 IPR038408 -
Mepo1g03364 622 ProSiteProfiles Gnk2-homologous domain profile. 109 214 IPR002902 -
Mepo1g03364 622 MobiDBLite consensus disorder prediction 593 622 - -
Mepo1g03364 622 Pfam Salt stress response/antifungal 131 212 IPR002902 -
Mepo1g03364 622 Pfam Salt stress response/antifungal 14 100 IPR002902 -
Mepo1g03364 622 Gene3D Transferase(Phosphotransferase) domain 1 379 582 - -
Mepo1g03364 622 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 16 618 - -
Mepo1g03364 622 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 269 378 - -
Mepo1g03364 622 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Mepo1g03364 622 SUPERFAMILY Protein kinase-like (PK-like) 283 575 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03364 Mepo-Chr1 38764940 38768046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03364 14 622 Receptor kinase-like Gene Family AT4G05200 44.357 1.29e-171 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g03364 PK_Tyr_Ser-Thr 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03364 - - cam:101497251 931.784