Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03363 ATGCTCCTACTCCTTTTTCTCTTTCACTTCACACCAACAAGTGCACAAGTTCCAATTTTCTTGTATAATTTTTGTAAAAACTCAACAGAAAAATCTCTCACAGCTTCATACAAATCCAACGTAAACAAATTCCTCTTGTGGATAAACTCAGATTCTGCCACAGGAAAAGAATTTAACAACAACAAAATAGGCAGCAACAACAACACCAGTGATGATGTTTATGGGAACTACGATTGTCGGGCTGACGTCACAGGAAGTTTCTGTCAATTTTGTATCAACACTGCTGTCAAAGAAATTGCTCAACGTTGTCCTAACAGTGACACGGCTGTTATATTTTATGATGTATGCATAATTCGCTACTCTAACAAGAATTTCTTTGGAAATGTTTCCACAACACCGTCGTGGAATGTTACTGGATCGAAAAAGATAAAAGACTCAACTGAACTTACAAAAGTAGAGGATTACATAGGGACTTTGATAAGAAAAGTGACGGTAGAGACTAATCAATCATGGGCAGCGAGTGAGTTTAATTCGAATGAAACTGGTAAAAGATATGGATTTCTGCAGTGTGCTAGAGAGCTTGATAAGGAAGGATGCAGACAGTGTTTGGAAGCTGTGTTGGACTTAGTTCCCAAGTGTTGTGGGACAAAGGTAGCATGGGAAGTTGTGGTTCCAAGTTGTGGGATCAAGTTTGATGATCAAAAGTTCTTCCAGTTAAATGAGCAATCAGGATCCTCTTCTCTTAAGCCAAATCAAGCCAAGCAGGAAGATGCAAGTAACAAAAAAACCTTGATCGTCATCTTAGTAAGTGTACTAATGGCAGTAGCTCTCCTATGTTGTTGTTTCTACTACTACTGGAGAAAGAATGGGCTGTGTAAAGGTGGATTTCTGTTGAGGAAAACATTGAATATAGACGACACATTGAATGGAGACCTTCCTATGATCCCTTTTTCTGTAATTCAACATGCCACTAATTACTTTTCATCATCATCAAAGTTAGGAGAAGGTGGCTTTGGACCTGTTTTCAAGGGTACTTTACCTGATGGGACAGAAATTGCAGTCAAAAGGCTTGCAGAAACGTCGGGGCAAGGTTCAGAGGAGTTCAAGAATGAAGTAATTTTCATAGCTAAACTGCAACACAGAAACCTCGTGAGACTCTTGGGTTGCTGCATTGAAGGAAATGAAAAGATACTAGTATATGAATACATGCCGAATTCAAGCCTTGACTTTCACCTTTTTGATGAAGAACAACATAAGCAATTAGATTGGTCATTACGACTAAGTATTATCAATGGAATCGCTAGAGGACTGCTATACCTTCACCAGGACTCTCGACTTAGAGTTATTCATAGAGACCTTAAAGCCAGCAACGTTCTTCTAGATGATGAAATGAATCCAAAAATATCAGATTTTGGATTGGCAAGGAAATTCGAAAAAGGTCAAAGTCAGACAAAAACAAAAAGAGTTATTGGCACCTATGGATACATGGCTCCAGAATATGCTATGGCTGGATTATTTTCAGTGAAATCCGATGTTTTCAGCTTTGGAGTTCTTTTATTAGAAGTTGTTTATGGAAAAAGGAACGGTGAATTCATACTTTCAGAACATAGGCAAAGTCTTATATTATATACTTGGAAGCTTTGGTGTGAAGGAAAAAGTTTGGAATTAATTGATCCAATCCACAAAAAATCATACATTGAAAGTGAGATTATGAAGTGCATACACATTGGTTTATTGTGTGTACAACAAGATGCTGCAGATCGACCAACCATGTCCACCGTAGTTGCTATGCTAGGTAGTGACACAATGCCCATTCCAAAACCCAAGCAACCGGCATTTTCAGTTGGAAGAATGACGGAGGACGATCCAACTTTAAAAAGTTATAAAGATAATTATGTTGATGAAGTACCCATAACTATTGTTTCACCTAGATAG 1935 0.3809 MLLLLFLFHFTPTSAQVPIFLYNFCKNSTEKSLTASYKSNVNKFLLWINSDSATGKEFNNNKIGSNNNTSDDVYGNYDCRADVTGSFCQFCINTAVKEIAQRCPNSDTAVIFYDVCIIRYSNKNFFGNVSTTPSWNVTGSKKIKDSTELTKVEDYIGTLIRKVTVETNQSWAASEFNSNETGKRYGFLQCARELDKEGCRQCLEAVLDLVPKCCGTKVAWEVVVPSCGIKFDDQKFFQLNEQSGSSSLKPNQAKQEDASNKKTLIVILVSVLMAVALLCCCFYYYWRKNGLCKGGFLLRKTLNIDDTLNGDLPMIPFSVIQHATNYFSSSSKLGEGGFGPVFKGTLPDGTEIAVKRLAETSGQGSEEFKNEVIFIAKLQHRNLVRLLGCCIEGNEKILVYEYMPNSSLDFHLFDEEQHKQLDWSLRLSIINGIARGLLYLHQDSRLRVIHRDLKASNVLLDDEMNPKISDFGLARKFEKGQSQTKTKRVIGTYGYMAPEYAMAGLFSVKSDVFSFGVLLLEVVYGKRNGEFILSEHRQSLILYTWKLWCEGKSLELIDPIHKKSYIESEIMKCIHIGLLCVQQDAADRPTMSTVVAMLGSDTMPIPKPKQPAFSVGRMTEDDPTLKSYKDNYVDEVPITIVSPR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03363 644 ProSiteProfiles Gnk2-homologous domain profile. 19 125 IPR002902 -
Mepo1g03363 644 Gene3D Transferase(Phosphotransferase) domain 1 403 604 - -
Mepo1g03363 644 ProSiteProfiles Gnk2-homologous domain profile. 131 236 IPR002902 -
Mepo1g03363 644 SMART serkin_6 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03363 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Mepo1g03363 644 SUPERFAMILY Protein kinase-like (PK-like) 311 624 IPR011009 -
Mepo1g03363 644 Gene3D Phosphorylase Kinase; domain 1 298 402 - -
Mepo1g03363 644 CDD STKc_IRAK 333 598 - -
Mepo1g03363 644 Pfam Protein tyrosine and serine/threonine kinase 330 598 IPR001245 GO:0004672|GO:0006468
Mepo1g03363 644 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 403 606 - -
Mepo1g03363 644 Pfam Salt stress response/antifungal 153 233 IPR002902 -
Mepo1g03363 644 Pfam Salt stress response/antifungal 25 122 IPR002902 -
Mepo1g03363 644 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 298 402 - -
Mepo1g03363 644 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 56 639 - -
Mepo1g03363 644 Gene3D - 135 236 IPR038408 -
Mepo1g03363 644 Gene3D - 18 125 IPR038408 -
Mepo1g03363 644 ProSiteProfiles Protein kinase domain profile. 327 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03363 Mepo-Chr1 38760553 38763654 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03363 2 644 Receptor kinase-like Gene Family AT4G05200 40.209 3.15e-176 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g03363 PK_Tyr_Ser-Thr 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03363 - - mtr:11406796 918.302