Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03359 ATGACCCTAACAACTGCACAATCACCATTTTACATGTATAGTGTTTGCGAGAATTCAACTCAAAAAACACTCAACGCTTCGTACCAATCCAACGTTAACAACTTTCTGTCATGGACAACATCGGATTCTGCCAAAGAAACAGTATCTAACAACAGCACCATAGTTAGCAACAACAGCAATGATCATGATACGGTTTATGGGTTCTATGATTGTCGGGGTGACATCACAGGAAGTTTCTGTCAATTTTGTATCAACACTGCTGTTAGAGAAATTGCAAAATATTGTCCCAGCAGTATCTCGGCTATGATATGGTATGATTTATGCATCATGGGTTACACTAACCAGAACCCCTCGGGAAGAGTTATTGTAACTCCATCATGGAATGTAACCGGATCGAAAATCGCTAAAGACTCAACAGAACTTGCGAAATCTGAGAATAACATGACGAGTTTGATACGAAAAGTGACTACAGAAGGCAATCCCAATTGGGCAATGGGTGAGTTCAATTGGAGTGACACTGAAAAAAGGTATGGTTTGGTGCAGTGTAATAGAGACCTTAGTAAGGATGGCTGCCGACAGTGTTTGGAGGCTATGTTGGAAAGAGTTCCTCAGTGTTGTGGAACAAAGGTTGGATGGGTAGTTGTGTGTCCTAGTTGTGGGATGAAGATTGATGATTATAATTTCTACGGACAACAAACAGGATCTCCTTCTCCTTTGCCAAATTCAGGCAAGCAAGATGGATTAAGTAAAACTAAAACCTTGATCATCATCTTAGTAAGTGTACCGTTGGCAGTAGCTCTTCTTGGCTGTTGTGTCTACTATTACTGGAGAAATAGTGAGTTATGTAAAGGTGGATTGTTGTTGAGGACCACTACTCCTATAGGTTTCCGTGATCATGTTCAAGAAGAGGAATCGTTGAATGCGGACCTTCCGACGATCCCCTTAACTGTAATTCAACAGGCCACAAATAACTTTTCAGAGTCGTCTAAATTAGGAGAAGGCGGATTTGGCCCTGTTTACAAGGGTACTTTACCAAATGGCACAGAAGTTGCTGTCAAAAGGCATGCAGAGATGTCATGTCAAGGTTCAGAGGAGTTCAAGAATGAAGTAATCTTCATAGCTAAACTGCAACACAGAAACCTCGTGAGACTCTTGGGTTGTTGCGTCGAAGGAAATGAAAAGATACTAGTATATGAATACATGCCGAACTCAAGCCTTGACTTTCACCTTTTCGATAAGGAAAAGCATAAACATCTAGATTGGAGATTACGACTAAGCATTATCACTGGAATTGCAAAAGGACTGCTATACCTTCATGAGGATTCTCGACTTAGAGTAATCCACAGAGATCTGAAAGCCAGCAATGTTCTTCTGGATGATGAAATGAATCCAAAAATATCAGATTTTGGATTAGCAAGAACATTTGAAAAAGATCAATGTCCGAAAAAAACAAAACGAGTTATTGGAACCTATGGATACATGGCTCCAGAATATGCTATGGCTGGGTTATTTTCGGTGAAATCCGATGTTTTCAGTTTTGGAGTTCTTATATTAGAAATAGTTTATGGAAAAAGAAATGGAGAATTCTTTCTTTCAGAACATATGCAAAGTCTTCTATTATATACTTGGAAACTCTGGTGTGAAGGAAAAAGTTTACAATTAATCGATCCATTCCACCAAAAGACGTACATTGAAAGTGAAGTCTTGAAGTGTATACACATTGGTTTATTGTGTGTACAAGAAGATGCAGCAGATCGACCAACCATGTCCACCGTTGTTCGTATGCTAGGGAGTGATACAATAGCCCTTCCACAACCCAATCAACCGGCATTTTCAATTGGGAGAATGTCCAAGAATGACGATCCAACTTCAAAAACTTCCAAGGATAATTATTCGGTTGATGAAGTAACTCTAACTATTGTTTCACCAAGATAG 1935 0.3948 MTLTTAQSPFYMYSVCENSTQKTLNASYQSNVNNFLSWTTSDSAKETVSNNSTIVSNNSNDHDTVYGFYDCRGDITGSFCQFCINTAVREIAKYCPSSISAMIWYDLCIMGYTNQNPSGRVIVTPSWNVTGSKIAKDSTELAKSENNMTSLIRKVTTEGNPNWAMGEFNWSDTEKRYGLVQCNRDLSKDGCRQCLEAMLERVPQCCGTKVGWVVVCPSCGMKIDDYNFYGQQTGSPSPLPNSGKQDGLSKTKTLIIILVSVPLAVALLGCCVYYYWRNSELCKGGLLLRTTTPIGFRDHVQEEESLNADLPTIPLTVIQQATNNFSESSKLGEGGFGPVYKGTLPNGTEVAVKRHAEMSCQGSEEFKNEVIFIAKLQHRNLVRLLGCCVEGNEKILVYEYMPNSSLDFHLFDKEKHKHLDWRLRLSIITGIAKGLLYLHEDSRLRVIHRDLKASNVLLDDEMNPKISDFGLARTFEKDQCPKKTKRVIGTYGYMAPEYAMAGLFSVKSDVFSFGVLILEIVYGKRNGEFFLSEHMQSLLLYTWKLWCEGKSLQLIDPFHQKTYIESEVLKCIHIGLLCVQEDAADRPTMSTVVRMLGSDTIALPQPNQPAFSIGRMSKNDDPTSKTSKDNYSVDEVTLTIVSPR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03359 644 Pfam Domain of unknown function (DUF3403) 598 644 IPR021820 GO:0004674
Mepo1g03359 644 Gene3D Phosphorylase Kinase; domain 1 294 400 - -
Mepo1g03359 644 ProSiteProfiles Gnk2-homologous domain profile. 123 228 IPR002902 -
Mepo1g03359 644 MobiDBLite consensus disorder prediction 606 620 - -
Mepo1g03359 644 MobiDBLite consensus disorder prediction 606 630 - -
Mepo1g03359 644 Pfam Protein tyrosine and serine/threonine kinase 328 596 IPR001245 GO:0004672|GO:0006468
Mepo1g03359 644 ProSiteProfiles Gnk2-homologous domain profile. 10 117 IPR002902 -
Mepo1g03359 644 SMART serkin_6 325 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03359 644 Gene3D Transferase(Phosphotransferase) domain 1 401 603 - -
Mepo1g03359 644 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 292 400 - -
Mepo1g03359 644 SUPERFAMILY Protein kinase-like (PK-like) 310 618 IPR011009 -
Mepo1g03359 644 ProSiteProfiles Protein kinase domain profile. 325 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03359 644 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 401 604 - -
Mepo1g03359 644 Gene3D - 125 228 IPR038408 -
Mepo1g03359 644 Gene3D - 9 116 IPR038408 -
Mepo1g03359 644 CDD STKc_IRAK 331 596 - -
Mepo1g03359 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Mepo1g03359 644 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 643 - -
Mepo1g03359 644 Pfam Salt stress response/antifungal 145 225 IPR002902 -
Mepo1g03359 644 Pfam Salt stress response/antifungal 16 114 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03359 Mepo-Chr1 38688329 38691785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03359 1 644 Receptor kinase-like Gene Family AT4G05200 41.395 3.92e-179 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g03359 PK_Tyr_Ser-Thr 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03359 - - mtr:11406796 1103.58